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NECEvent2014_6_5_scaffold_240_25

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 26126..26689

Top 3 Functional Annotations

Value Algorithm Source
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD {ECO:0000313|EMBL:KEL79186.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KEL79186.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 396
  • Evalue 2.70e-107
N-acetyl-anhydromuranmyl-L-alanine amidase similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 187.0
  • Bit_score: 383
  • Evalue 4.80e-104

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGTTGTTAGACGAGGGCTGGCTGGCAGAGGCGCGACGCGTTCCCTCTCCGCATTACGATTGCCGCCCGGATGACGAAAACCCTTCTCTGCTGGTGGTGCATAATATCAGCCTGCCGCCCGGCGAGTTTGGCGGCCCGTGGATAGACGCGCTGTTTACTGGCACGATTGATCCCAACGCCCATCCTTATTTTGCCGGAATCGCCCATTTGCGCGTTTCGGCCCATTGTTTAATTCGCCGTGATGGTGAAATCGTGCAGTATGTCCCCTTTGATAAACGCGCCTGGCATGCCGGCGTCTCGAGCTATCAGGGCCGTGAACGCTGTAATGATTTCTCAATTGGTATTGAGCTGGAAGGGACGGATACGCTGGCCTATACCGATGCGCAGTACCAGCAACTGGCAGCCGTGACCAATGCCCTGATTACGCGTTATCCGGCTATTGCTAACAATATGACAGGACATTGCAATATTGCGCCCGAGCGTAAGACCGATCCCGGGCCCTCATTTGACTGGGCAAGGTTTAGCGCCCTGGTCACCCCCTCGTCGCACAAGGAGATGACATGA
PROTEIN sequence
Length: 188
MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFSALVTPSSHKEMT*