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NECEvent2014_6_5_scaffold_371_1

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 2..715

Top 3 Functional Annotations

Value Algorithm Source
Sigma-E factor negative regulatory protein {ECO:0000313|EMBL:KDF13744.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 473
  • Evalue 1.30e-130
rseA; anti-RNA polymerase sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 237.0
  • Bit_score: 445
  • Evalue 7.70e-123

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATAATAAAGTTCAACCGCTTATCAGGCGTTGACGATAGCGGGATACTGGAAAAGGTATTAGGCATGCAGAAAGAAAAACTTTCCGCTTTAATGGATGGCGAAACGCTGGATACTGAGTTGCTCAAAGAGCTGGCTCACGACCCGGAAATGCAAAAAACCTGGGAGAGTTATCACCTGATTCGCGATTCCATGCGAGGTGATACTGCCGACGTTCTCCATTTCGATATTTCCGCCCGCGTAATGGCCGCCATCCAGGATGAGCCGGTACGTCAGACGGCGCCATTGATTCCTGAGGCCCAGCCAGCACCGCACCAGTGGCAGAAAATGCCGTTCTGGAAGAAAATGCGTCCGTGGGCCGCGCAGCTTACTCAAATGGGTGTGGCCGCGTGTGTATCACTTGCAGTTATTGTTGGCGTCCAGCACTATAATGGGCAATCTGAAACGTCCCAGCAGCCCGAAACGCCGGTATTTAATACATTACCGATGATGGGTAAAGCCAGTCCGGTAAGCCTGGGTGTACCTTCTGATGCGACGGCCAGCGGCGGTCAACAACAGCAGGTACAGGAGCAGCGTCGTCGTATTAATGCCATGTTGCAGGATTACGAACTGCAACGTCGACTGCACTCTGAACAGCTTCAGTTTGAGCAGGCCCAGACACAGCAAGCCGCTGTGCAGGTGCCAGGAATTCAAACTTTAGGAACGCAATCGCAGTAA
PROTEIN sequence
Length: 238
IIKFNRLSGVDDSGILEKVLGMQKEKLSALMDGETLDTELLKELAHDPEMQKTWESYHLIRDSMRGDTADVLHFDISARVMAAIQDEPVRQTAPLIPEAQPAPHQWQKMPFWKKMRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSDATASGGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ*