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NECEvent2014_6_5_scaffold_387_3

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 1735..2076

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 233
  • Evalue 2.20e-59
Transcriptional activator RamA {ECO:0000313|EMBL:EFE08385.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 233
  • Evalue 1.10e-58

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Taxonomy

Citrobacter youngae → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGACGATTTCTGCTCAGGTAATTGATACGATTGTTGAATGGATTGATGATAATTTGAATCAACCATTGCGCATTGATGATATTGCACGCCATGCGGGATATTCAAAATGGCACCTGCAGCGTCTTTTTATGCAGTATAAAGGCGAAAGCCTCGGGCGTTACATTCGGGAAAGTAAGCTGCTACTGGCCGCGCGCGATCTACGCGATACCGACCAGAAAGTGTACGACATCTGTTTGAAATACGGATTCGATTCGCAGCAGACCTTTACGCGTATTTTCACCCGTACGTTCAGCCAGCCGCCGGGCGCTTATCGCAAAGAAAATCATAGCCGAACGCATTAA
PROTEIN sequence
Length: 114
MTISAQVIDTIVEWIDDNLNQPLRIDDIARHAGYSKWHLQRLFMQYKGESLGRYIRESKLLLAARDLRDTDQKVYDICLKYGFDSQQTFTRIFTRTFSQPPGAYRKENHSRTH*