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NECEvent2014_6_5_scaffold_482_13

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 9361..9936

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 381
  • Evalue 9.30e-103
lipopolysaccharide transporter similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 191.0
  • Bit_score: 370
  • Evalue 2.50e-100

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCAAAACCAGACGTTGGGTTATCATTCTACTGTCGCTTGCTGTCCTTGTGATGATTGGTATTAATCTGGCAGACAAAGAGGACACCGCTCAGGTCGTCGTCAATAACAACGAGCCAACCTATAAGAGCGAACATACTGATACCGTCGTGTATAGTCCGGAAGGCGCGCTGAGCTATCACTTGATCGCACAACACGTTGAATATTATTCGGAACAAGCGGTTTCGTGGTTTACTCAACCAGTATTAACCACATTTGATAAGGATAAAGTACCGACCTGGACGATCAAGGCCGATAAAGCCAAATTGACCAACGATCGGATGCTGTATCTGTACGGCCATGTTGAGGTTAACGCCCTGGTGCCTGACTCTCAACTACGCAGAATTACGACCGATAACGCGCAGATTAACCTGGTGACACAAGATGTCACTTCCGATGATCTGGTGACGTTGTATGGCACAACATTTAACTCCAGCGGACTGAAGATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTGAAAAGGTTAGAACCTCATATGAAATCCAAAACAAACAAACTCAGCCTTAA
PROTEIN sequence
Length: 192
MSKTRRWVIILLSLAVLVMIGINLADKEDTAQVVVNNNEPTYKSEHTDTVVYSPEGALSYHLIAQHVEYYSEQAVSWFTQPVLTTFDKDKVPTWTIKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSDDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP*