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NECEvent2014_6_5_scaffold_579_5

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(6295..7593)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 432.0
  • Bit_score: 865
  • Evalue 3.70e-248
rumA; 23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 432.0
  • Bit_score: 827
  • Evalue 2.20e-237

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGGCGCAATTCTACTCTGCAAAACGACGCGTGACGACGCGTCAGATCATAACCGTTACCGTCAATGACCTCGATCCTTTTGGTCAGGGCGTCGCTCGCCATAACGGAAAAGCGTTGTTTATACCGGAATTGCTACCCCAGGAAAGCGCCGAGGTGGTGATTACCGAAGATAAAAAACAGTTCGCCCGCGCGCAAGTAAAACGACGTTTGAACAACAGCCCTGAGCGTGAAGTGCCACGTTGCCCGCATTTTGGCGTATGCGGCGGTTGCCAGCAGCAGCATGCCAGCATCTCGTTACAGCAGCGTAGTAAAAGCGCGGCGTTGTCGCGTTTAATGAAATGTGACGTGTCAGATGTTATAGCTGATACGCCGTGGGGCTATCGTCGTCGTGCCCGATTGAGCCTGAACTATCGGCCAAAAGAACACAAATTGCAGATGGGGTTTCGCAAATCAGGCTCCAGCGACATTATCGATGTCAAACAATGCCCTGTTTTGGTGCCCCAGCTTGAAGCGTTATTGCCCCATCTCAGGGCGTGTCTGGAAAGTCTTCAAGGGTTACGCCACCTTGGACATGTTGAACTGGTGCAGGCAGGGAGCGGAACCCTGATGATTTTGCGCCACACGGCGCCATTAAGTGCAGCGGATAAAGAAAAACTGGAATGCTTTTCGCATTCTCAGGGGCTGTCTTTGTTTCTGGCCCCGCAAAGCGAGATACTGGAATCAATATCAGAAGAATCGCCCTGGTATGACTCAAATGGACTACGGTTAACCTTCAGCCCGCGCGATTTTATTCAGGTTAACGAAGGGGTAAACCAACAAATGGTGGCCCGTGCGCTGGAATGGCTCGATGTGCAACCTGAAGATCGCGTACTCGATCTGTTCTGTGGAATGGGTAATTTTACCCTGCCGCTGGCAACTCGAGCAGCAAGCGTGGTTGGCGTGGAAGGTGTTCCGGCGCTGGTTGAAAAAGGCCGGGAGAATGCGCTGAATAACGGATTACACAATGTGACATTCTTTCATGAGAACCTTGAGGAAGATGTTACCCGGCAGCCGTGGGCGAAAAACGGATTCGACAAAGTTTTGCTCGATCCTGCGCGTGCGGGGGCTGCTGGTGTGATGCAACATATTATAAAATTAGAACCTATACGCGTTGTTTATGTATCCTGTAACCCGGCAACGCTGGCTCGTGACAGCGATGCTTTGCTCAATGCGGGATATGCCATCCGGCGGCTGGCGATGCTCGATATGTTCCCGCACACTGGACACCTGGAATCAATGGTCCTGTTTGAGCGTTTGTAA
PROTEIN sequence
Length: 433
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHNGKALFIPELLPQESAEVVITEDKKQFARAQVKRRLNNSPEREVPRCPHFGVCGGCQQQHASISLQQRSKSAALSRLMKCDVSDVIADTPWGYRRRARLSLNYRPKEHKLQMGFRKSGSSDIIDVKQCPVLVPQLEALLPHLRACLESLQGLRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLECFSHSQGLSLFLAPQSEILESISEESPWYDSNGLRLTFSPRDFIQVNEGVNQQMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENALNNGLHNVTFFHENLEEDVTRQPWAKNGFDKVLLDPARAGAAGVMQHIIKLEPIRVVYVSCNPATLARDSDALLNAGYAIRRLAMLDMFPHTGHLESMVLFERL*