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NECEvent2014_6_5_scaffold_2601_2

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(439..930)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 324
  • Evalue 2.30e-86
HTH-type transcriptional regulator IscR {ECO:0000256|HAMAP-Rule:MF_01176}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Cit similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 324
  • Evalue 1.10e-85

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGACTGACATCAAAAGGGCGTTATGCCGTGACCGCAATGTTGGACGTTGCGCTCAACTCCGAAACGGGCCCGGTACCGTTGGCTGATATTTCTGAACGTCAGGGAATTTCCCTGTCATATCTGGAGCAGCTGTTTTCCCGTTTGCGTAAAAACGGTCTGGTTTCCAGCGTACGTGGACCAGGCGGCGGGTATCTGCTGGGTAAAGATGCCGGCAGCATCGCAGTAGGTGAAGTAATCAGCGCTATGGACGAGTCTGTAGATGCGACCCGTTGCCAGGGCAAAGGCGGTTGTCAGGGCGGCGATAAATGCCTAACCCACGCGCTGTGGCGCGATCTGAGCGATCGTCTGACCGGTTTCCTCAACAACATTACGTTGGGCGAACTGGTGAATAATCAGGAAGTCCTGGATGTGTCTGGTCGCCAGCACACGCATGACGCTCCACGCACTAATCGTGCACAAGACGCGATCGACGTTAAGTTACGCGCATAA
PROTEIN sequence
Length: 164
MRLTSKGRYAVTAMLDVALNSETGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAMDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTNRAQDAIDVKLRA*