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NECEvent2014_6_5_scaffold_130_2

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 858..3539

Top 3 Functional Annotations

Value Algorithm Source
NtrC family Transcriptional regulator, ATPase domain {ECO:0000313|EMBL:KJZ85156.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 893.0
  • Bit_score: 1742
  • Evalue 0.0
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 889.0
  • Bit_score: 1264
  • Evalue 0.0

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2682
ATGACTAAAAAAGAGTTAATTTTACAAAAACTAAGACAGTTAAACTGTTCTGAAGGAATAGATACTAAAACATTAGCTTCATTAGTAAATATGTCCAGAGCTAATTTAAGCCATGAATTAAATGAATTATGTAAAGAAGGAAAATTAAATAAATCAACCGGAAGACCAGTTTTATTTTATCTAGCTGACTGCAAGAAAAAAGAAGTAAAATCTCAGCTTGATTTATTAGCTGAAAATAATATCTCATTAAAAAGTTCTATCGAACAAGCTAAAGCAGCGATTTTATATCCTCCAAAAGGAATGAACTGTTTAATTTTAGGAAGTACTGGTGTTGGTAAATCCATGTTTGCTTCATTAATGCATAATTACGCCTTAACAATGAATGTAAAAAGTGAAGATTCTCCTTTTATAGTTTTTAACTGTGCTGATTATAGTAATAATCCTCAATTACTAACTTCTCAATTATTTGGTGTAAAAAAAGGTGCTTATACAGGAGCTGAATGTGATAAAACCGGATTAATCGAACAAGCTGATGGCGGAATTTTATTTCTAGATGAAGTACATAGACTTCCTCCAGAAGGTCAGGAAGCTCTTTTTGTATTCCTTGATACAGGTACTTTTAGACGTGTAGGTGACTCTGAATCAAGAAAATCTGATGTTTTAATAATTTCAGCAACTACTGAAAATCCTGACTCTGCACTTCTTAACACTTTTAGAAGAAGAATACCTATTGTTATAACTATTCCTTCATTGAAAGAAAGAACTCTTGAGGAACGACTATATCTTATAAAAAGCTTCTTTAAATATGAAAGTATAAGATTAAGTAAAGATATATATGTTTCTTTAAACTCACTCAGAGCACTCTTATCATATGACTGTCCAAACAATATAGGACAATTAAAAAGTGATGTTCAGATGCTTTGCGCAAAAGCATATTCTGAATTCTTAACAAATGTAAGAGGTGATGTTAGAATCCACAGTGGAAACCTTACACCATACATTAAAGAAGGACTTTATAAAGAAAAAGAACATAGAATATTGTGGAATAATTTAATGAGCGATGAAATAGAATTTTTCAGATTTAATGGATCAAGTGATAATTCTCTTGATATATTTGAAAACAGTGATAACAGTATTTATGATTTCTTAGAAAACAAATTAAAGAAACTAAAATCACTGGAAATCTCTGATATAGATATTGAAAATATTCTTGAAAAAGATATTGCCAAGCACTTTAAACATAATTTTTCTAATATATCTAAGGAATTTAGCAAAAAAAATCTACTATCAATTATAGAACCAAGTGTTTTAGAATGTTTTGATAAGATTATAAATCATATAACAGAAAGACTCCCTATACAATTTGATAATAACCTTTACACTGCTTTTGCTCTTCATATTAATACACTTGTTGATAGAATACACAGTAAAAAGATAATAAAAAATCCTAATCTTAGAAAAATACAAAATCTATATCCAAAAGAATTTTCTATAGCATTAGAAGTCAAAGAAATTTTATCTGAGTATCTTTACTCTTCGATTCCAATAGACGAAGCTGGCTATATAACATTATTTTTAATACCTGACACAACACTAAATACACAGCCAAAAGATAAAGTAAAAGTAATTCTTATTGCTCATGGAGAATCAACGGCAACTTCAATGAGTGATGTTGCAAGTAAATTATTAGGTGAAGACTATGTACTTCCTATAAATGCTCCAATTGATGTTGAACCATCAAAAGTGCTAGACCACTTACGACTTATTATAAGTGAAAATCCAACTTCTGCTGGTTATTTGTTATTAGTTGATATGGGATCTCTTCTCGCTTTTGCTGATACTGTAAAACAAGAATTAGATGTAGAGCTTCAAGTTATTTCGCTTGTGTCTACACTTCATGTACTTGAAGCTGCAAGAAAAGCATTATTAGGATTATCATTAGATGAAATATATAATGATGTTATAATGATAAATTCTTATTTACAAGTTCATAAAAACTTAAATAATAAGACAATTGATACTAACAAAACTTTAATAATAACTGCATGCTTGACTGGAGAAGGTGGTTCTGCTGCAATAAAGGATTTCTTATCTGTTAATTTAAAGTTTGATCCAGATTTATTTGAAATAGTATGTCTAAGCTATTGCAATAAAGAGAGTTACAAGGAAATGATTTTAAATCTTGAAACCAAAAATCAAGTTTTATTTGTTGTATCTTCATTTCATATTGATTCTCTAAATACAAATCAATTTTCTATGTATGAAGCCCTTAGTGGTTCAGTACTAATGCAGATGCAAAGATTAATAGATGAAAAAACAACATTACTAAATATTCCTAAAATTTTAAATGAAAATATTCCTAATATATCAGGAGCAGAGCTTACTAATGATATACAAAATGTATTAACTGAACTTGAAAAGAGAATAAATAAACAATTTACTCCTGATAGTTTGGTTGGACTTACTCTACATCTATCCTTTTTAATTGGAAGATTAAAAAATAATGAAAATACTGTCTTGTATCCTAATAAAGATATATTTATAAAAGATAATTTTTCTATGTATAATATAATTAAGGAAACCCTTAATCCCTTAAAAATAAAATATAATCTTACTAATTTGTCTGATGATGAAATATGTTACCTAGTTAAACATTTATCTACAAATAAAGACATACAATAA
PROTEIN sequence
Length: 894
MTKKELILQKLRQLNCSEGIDTKTLASLVNMSRANLSHELNELCKEGKLNKSTGRPVLFYLADCKKKEVKSQLDLLAENNISLKSSIEQAKAAILYPPKGMNCLILGSTGVGKSMFASLMHNYALTMNVKSEDSPFIVFNCADYSNNPQLLTSQLFGVKKGAYTGAECDKTGLIEQADGGILFLDEVHRLPPEGQEALFVFLDTGTFRRVGDSESRKSDVLIISATTENPDSALLNTFRRRIPIVITIPSLKERTLEERLYLIKSFFKYESIRLSKDIYVSLNSLRALLSYDCPNNIGQLKSDVQMLCAKAYSEFLTNVRGDVRIHSGNLTPYIKEGLYKEKEHRILWNNLMSDEIEFFRFNGSSDNSLDIFENSDNSIYDFLENKLKKLKSLEISDIDIENILEKDIAKHFKHNFSNISKEFSKKNLLSIIEPSVLECFDKIINHITERLPIQFDNNLYTAFALHINTLVDRIHSKKIIKNPNLRKIQNLYPKEFSIALEVKEILSEYLYSSIPIDEAGYITLFLIPDTTLNTQPKDKVKVILIAHGESTATSMSDVASKLLGEDYVLPINAPIDVEPSKVLDHLRLIISENPTSAGYLLLVDMGSLLAFADTVKQELDVELQVISLVSTLHVLEAARKALLGLSLDEIYNDVIMINSYLQVHKNLNNKTIDTNKTLIITACLTGEGGSAAIKDFLSVNLKFDPDLFEIVCLSYCNKESYKEMILNLETKNQVLFVVSSFHIDSLNTNQFSMYEALSGSVLMQMQRLIDEKTTLLNIPKILNENIPNISGAELTNDIQNVLTELEKRINKQFTPDSLVGLTLHLSFLIGRLKNNENTVLYPNKDIFIKDNFSMYNIIKETLNPLKIKYNLTNLSDDEICYLVKHLSTNKDIQ*