ggKbase home page

NECEvent2014_6_5_scaffold_589_7

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 3269..3877

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF family {ECO:0000313|EMBL:EEP55804.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 202.0
  • Bit_score: 415
  • Evalue 6.10e-113
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 191.0
  • Bit_score: 209
  • Evalue 7.90e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGATTACAAATACATTGAAACATTAGTCAAACAATCAAAAGATGGTAATGAAATATCTAAAGAAAATTTAGCAAAGGAATTTACCCCTTATATAAAAAATTTATGCAGCAAGACTTTCATCCACGGATATGATTTTTATGATTTGCAAAATGAATGCTTCCAAAGTCTCTTTAAATGTGTGTCATCATATAACTTAGAAAATCATAGATTTGTTGCCTATGCCACAAATGGAATAAAGAATAATCTGTATGACTTGATACGTAAAAATCAAAATAGAAAAATATTTGATGGAAATGACTGCCTTATAATAACAGATGAATTTCAAAGAAGCCTGATTTCAAATGAAATTAATGCAGAAGATTTAATGTGTAGAAAATGTGATTATACTGAAATTATGAATGCATTAAATAAACTTACACATACTGAACATGAAATAATAACCTTCTTATTTTTTCCAAAAACTTCTTCTAAACACACACTAAAAGAGTTCTCAGTTTTAAAAAATATATCATATTCAGCTGCTATAAAAAGAAAAAATACTGCATTAAGAAAACTTTATGAACTGTTACAACCTATTTTTTATGGAGGTGAGTTACATGGAAATTAA
PROTEIN sequence
Length: 203
MDYKYIETLVKQSKDGNEISKENLAKEFTPYIKNLCSKTFIHGYDFYDLQNECFQSLFKCVSSYNLENHRFVAYATNGIKNNLYDLIRKNQNRKIFDGNDCLIITDEFQRSLISNEINAEDLMCRKCDYTEIMNALNKLTHTEHEIITFLFFPKTSSKHTLKEFSVLKNISYSAAIKRKNTALRKLYELLQPIFYGGELHGN*