ggKbase home page

NECEvent2014_6_5_scaffold_1071_9

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(5080..6438)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 452.0
  • Bit_score: 873
  • Evalue 1.10e-250
ffh; signal recognition particle protein Ffh similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 452.0
  • Bit_score: 796
  • Evalue 3.40e-228

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1359
ATGGCTTTTGAAGGTTTAGGAGAAAAATTACAGGAGACGTTCCGTAAACTAAAAGGTAAAGGAAAGTTAACTGAAAAAGATATTAAAGAAGCCATGAGAGAAGTAAAGCTTGCCTTATTAGAAGCAGACGTTAACTACAAAGTTGTTAAAACATTTGTATCAAATGTTAGTTCAAAGTGTGTTGGAAGTGAAGTTTTAGAAAGCTTAACGCCAGGGCAGCAAGTAATTAAGATAGTTAACGAAGAACTTACTAATCTTATGGGTGGAAGTGAAAGTAAACTTAGCTACAATAGCAGTGGTCCTACAGTGATAATGCTTGTCGGTCTTCAAGGTGCTGGTAAAACTACAATGTGTGGTAAACTTGCATTGAACCTTAGAAAAGATAACAAGAAACCTTTATTGGTAGCTTGTGATATTTATAGACCAGCAGCTATAAAACAGTTAGAAGTTGTAGGAAAACAAATTGAAATTCCAGTATTCTCTATGGGTGATAAAGTAAGTCCTGTAGATATAGCAAAAGCTGGTATAGCACATGCTAGGGATAATGGAAATAACATAGTTATCATTGATACTGCAGGTAGACTTCATATTGATGAAGATTTAATGCAAGAATTAAAAGATATAAAAGAAAATGTAAAACCATCAGAGATACTTTTAGTAGTAGACTCAATGACAGGTCAAGATGCAGTTAATGTGGCAGAAAACTTTAACAATGATTTAGATTTAAGTGGAGTTATATTAACAAAGCTTGATGGTGATACTAGAGGTGGAGCAGCTCTTTCTATAAAGAGTATAATAAACAAGCCGATAAAATATGTTGGACTTGGTGAAAAAATGAATGATTTTGAAGTGTTCCATCCAGATAGAATGGCATCAAGAATTCTTGGGATGGGTGATGTATTATCACTTATTGAAAAGGCTCAGGAAGCAATTGATGAAAAAGAGGCTGCAGATTTAGGTAAAAGAATGTTAAATCAAGAATTTAACTTTGAAGATTATCTAATGGCAATGGAGCAGATGAAAAAGCTTGGTCCCCTTAATAAAATTTTAGAAATGATGCCAGGGATGAACTCAAAGGAACTTCAAGGGCTAGATTTAGAAAAAGGTGAAGTGGCAATGAATGTTACTAAAGCCATAATCTATTCTATGACTCTTAAAGAAAGACGTAATCCAACTCTTATAGCAAAATCTAATTCGAGAAAAATAAGAATAGCTAAGGGGTCAGGAACATCAGTTCAAGAAGTCAATAAGCTTATGAAGAGTTACGAAATGATGAAGAAGCAGATGAAGCAGATGAAATCATTCCAAAAGCAATTTAGCAAGAAAGGTGGTCTTTTCGGAGGCAAATTACCTTTCTAG
PROTEIN sequence
Length: 453
MAFEGLGEKLQETFRKLKGKGKLTEKDIKEAMREVKLALLEADVNYKVVKTFVSNVSSKCVGSEVLESLTPGQQVIKIVNEELTNLMGGSESKLSYNSSGPTVIMLVGLQGAGKTTMCGKLALNLRKDNKKPLLVACDIYRPAAIKQLEVVGKQIEIPVFSMGDKVSPVDIAKAGIAHARDNGNNIVIIDTAGRLHIDEDLMQELKDIKENVKPSEILLVVDSMTGQDAVNVAENFNNDLDLSGVILTKLDGDTRGGAALSIKSIINKPIKYVGLGEKMNDFEVFHPDRMASRILGMGDVLSLIEKAQEAIDEKEAADLGKRMLNQEFNFEDYLMAMEQMKKLGPLNKILEMMPGMNSKELQGLDLEKGEVAMNVTKAIIYSMTLKERRNPTLIAKSNSRKIRIAKGSGTSVQEVNKLMKSYEMMKKQMKQMKSFQKQFSKKGGLFGGKLPF*