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NECEvent2014_6_5_scaffold_375_14

Organism: NECEvent2014_6_5_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(12679..13494)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 271.0
  • Bit_score: 538
  • Evalue 4.90e-150
aroE; shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 271.0
  • Bit_score: 536
  • Evalue 3.80e-150

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 816
TTGAAGTTATTTGGATTAATAGGTGAGAAGTTAGGACATAGTTTATCTCCAGAGATACATAATAAAGTTTTTAAAGATAATAATATAGATGGATTATATAATCTTTTTTCTGTAAAAAAAGATTTTGAAAATAATATTGTAGAAAGTCTAAAATGCTTAGGAGTAAAGGGAGCCAATGTTACAATACCATATAAAGAGAAGGTTATGGATCAGCTAGATATTATTTCACATGAGGCCAAAGCTATAGGAGCAGTAAATACTATTTTAATAAAAGATGGAAAATCCTATGGTTATAACACTGATTATTATGGATTTGGTAAAATGCTAGAAAGAGCAAAGGTTAATATTGAAGGAAATAGCTTTTTTGTTTTAGGAGCAGGGGGAGCAGCTAGAAGTATTTTAAAATATTTAGAGGATAGCAAAGCTAAAAAAATAGTTTTGGTTTCTAGGGACAAAGAGAAAGCTTTTAAAAAATTTAAAGATTTCAATATTAATTTTATGAGTTATGGTGAACTTGAAGAAATTCATGAAGAGTTTGCTTTAATCAATACAACTCCCTGTGGAATGTATCCTAATACAAATTCAGTAGCTGTTTCAGAAAAGGTAATTAAAAAGTTTAAGGTTGCTGTGGATATAGTCTATAATCCTTTGGAAACTAAGTTTTTAAAAATGGCAAAGGATAATGGTCTTAAAACAGTGGATGGATTATTTATGTTAGTTGGACAAGGGGTTAAAGCTGAAGAGATTTGGAATGGAATAAAAGTAGATAAGTCTACAGAAGAAGAGATATATGAAGAATTGAAATGTAGATTTTAA
PROTEIN sequence
Length: 272
LKLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVTIPYKEKVMDQLDIISHEAKAIGAVNTILIKDGKSYGYNTDYYGFGKMLERAKVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINFMSYGELEEIHEEFALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEIYEELKCRF*