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NECEvent2014_6_5_scaffold_2844_2

Organism: NECEvent2014_6_5_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 412..1818

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB4 component-like protein,conjugal transfer ATP-binding protein TraC,Type IV secretory pathway, VirB4 components,type-IV secretion system protein TraC,AAA-like domain {ECO similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 470.0
  • Bit_score: 498
  • Evalue 1.30e-137
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 465.0
  • Bit_score: 483
  • Evalue 6.60e-134

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1407
ATGGCACAAGTAGAGCAGAAATATAATTACAATCCATACTTTTTGTCAAGAGTACAACCACAAGGTGGTATTAATTTTGAGGATAATATAATTAAGAAAGGTGATGGATATGAGGTTGTAATTCATCTTTATGATTATCCAAATGAAGTAGAAGAATTTTGGCTAAATGCTATTATGAATATAAGAAATACAATAAGTACAATTGATATTGGTCTTGAAGAAAAGGGAGAAGCATTAAAGAAACTTGGAAAATCAATTAAAGAGCAAGAATCAAGATATTATGATAGTATGGAATACCAAGATAAAGTAATAGCCAAAGAAGAATTTAATACTCTTATGACACTTCAAGAAGAAGTATTAAAATATGGAGAAGTTATAAAGTTAATTCATTTAAGAATATATGTAGCAGAAAGAACTAGAGAAGCGGTTGAAAAGAAGGTAGGTGAAATCTTAGATGAATTAGAACACTTAAATTATAGGGGGATTATTCTTCTTAATGAGCAAGAATATGAATGGCAATCATTATTTACGAATTTTGATAAACAAAAAAAGTTTGAAAATGCAAGAGAAGGAAAGGGGCTACCTTCACTAAGTTTAGGTGCAGGTTTTCCTTTTAATTATACAAATATAAGTGATCCTTTTGGACAGTTCCTAGGTACAACATTTACCGGAGGAAGTGTCCTTTTTGATTTGTTTCATAAAGATAAAAAGAGAAAATCGTATAATGCATTATTAACTGGTATGACTGGTGCTGGAAAATCAACAGCTTTAAAAAAGATAATATTAAACAATTATTTAATTGGAAATAAAATAAGAATCATAGATAAGTCGGGAGAGTTCAGAACACTCGTTAAAAGGTTTGGAGGTAAAGTAGTTTCGCTAGATGGTTCAAGTGGAATAATAAATCCACTACACATTTATCCTACTGTAATTGATGAAGAAACTAATGAGATTTTAGAGGAACAATGTTATACAGTTCATATGAGTAAATTATCAATGCTATATAAGTCACTATCAGGAAATGCAACTAGTGATATTGCAGAATTTGATAGAGTAGTGAGAAACTTTTATATTTCATATGGAATTGATATATCTAAATGTACTCAATATAAAAAAGAAGATTATCCTATAATGGAGGAACTATTAGAATTTACTAAAAAGGAATTGTATTCAGATGTTGAAAATGAACTTGTAAGGGAGAATTTAACGCCAAGTAGAGTAAATAGATTAGAGAACATAATTCTTATATTAGAGAAGCTAGTTTATACTTATGGAAAATTATTTAATGGTCATTCAACTATTGATGATTTATCAGAAGAGCAAATAATTTCTTATGAAGTAGGTACACTACATCAGTATGAAAATCAAATATTTATGACACAAATATTTAGTGTATTAACATCTATT
PROTEIN sequence
Length: 469
MAQVEQKYNYNPYFLSRVQPQGGINFEDNIIKKGDGYEVVIHLYDYPNEVEEFWLNAIMNIRNTISTIDIGLEEKGEALKKLGKSIKEQESRYYDSMEYQDKVIAKEEFNTLMTLQEEVLKYGEVIKLIHLRIYVAERTREAVEKKVGEILDELEHLNYRGIILLNEQEYEWQSLFTNFDKQKKFENAREGKGLPSLSLGAGFPFNYTNISDPFGQFLGTTFTGGSVLFDLFHKDKKRKSYNALLTGMTGAGKSTALKKIILNNYLIGNKIRIIDKSGEFRTLVKRFGGKVVSLDGSSGIINPLHIYPTVIDEETNEILEEQCYTVHMSKLSMLYKSLSGNATSDIAEFDRVVRNFYISYGIDISKCTQYKKEDYPIMEELLEFTKKELYSDVENELVRENLTPSRVNRLENIILILEKLVYTYGKLFNGHSTIDDLSEEQIISYEVGTLHQYENQIFMTQIFSVLTSI