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NECEvent2014_6_5_scaffold_258_1

Organism: NECEvent2014_6_5_Klebsiella_oxytoca_55_61_partial

partial RP 19 / 55 MC: 4 BSCG 18 / 51 ASCG 8 / 38 MC: 3
Location: 50..2956

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 968.0
  • Bit_score: 1920
  • Evalue 0.0
RNA polymerase associated protein RapA similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 968.0
  • Bit_score: 1913
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2907
ATGCCTTTTACACTTGGTCAACGCTGGATTAGCGACACAGAGAGCGAACTGGGATTAGGGACGGTCGTTGCGCTGGACGCGCGCATGGTGACCCTGCTTTTCCCCGCCATCGGCGAAAACCGTCTGTACGCACGCAACGACTCCCCGATCACCCGCGTGATGTTTAACCCGGGCGACACCATCACCAGCCATGAAGGCTGGCAACTCCAGGTTGACGAAGTTAATGAAGAGAACGGCCTGCTGGCCTACACCGGCACCCGACTCGACACCCAGGAAGCCAACGTTACCCTGCGTGAAGTGCTGCTCGACAGCAAGCTGGTTTTCAGCAAACCGCAGGACCGTCTGTTCGCCGGACAGATTGACCGTATGGATCGTTTTGCCCTGCGCTATCGCGCGCGCAAATTCCAGAGCGAACAGTACCGCATGCCGTGGAGCGGCCTGCGCGGTCAGCGCACCAGCCTGATCCCGCATCAGCTGAATATCGCTCATGACGTTGGCCGCCGCCATGCGCCGCGCGTCCTGCTGGCGGACGAAGTGGGTCTGGGTAAAACCATCGAAGCCGGGATGATCCTGCATCAGCAGCTGCTCTCCGGCGCCGCCGAACGCGTACTGATTGTCGTTCCGGAAACCCTGCAGCACCAGTGGCTGGTGGAAATGCTGCGCCGCTTTAACCTGCGCTTCTCGCTGTTTGACGATGAGCGCTATGCCGAAGCGCAGCACGATGCAATTAACCCGTTTGAAACCGAACAGCTGGTGATCTGTTCGCTGGATTTCGTACGCCGCAGCAAGCAGCGTCTGGAACACCTGTGCGAAGCGGAGTGGGATCTGATGGTCGTTGATGAAGCGCACCACCTGGTCTGGAGCGAAGACGCCCCGAGCCGGGAATATCAGGCGATTGAACAGCTGGCCGAATGCGTGCCGGGCATTCTGCTGCTCACCGCGACGCCGGAGCAGCTGGGAATGGAGAGCCATTTCGCCCGTCTGCGCCTGCTCGACCCCAACCGTTTCCACGACTTCGCCCAGTTTGTTGAAGAGCAGCAGAACTACCGTCCGGTTGCCGACGCCGTCGCCCTGCTGCTGGCCGGCAATAAGCTGAACGACGCCGAGCTGAACGCGCTGAGCGATCTGATCGGCGAACAGGATATCGAGCCGTTATTGCAGGCCGCCAACAGCGATCGCGATGATGCCCAGGCCGCTCGTCAGGAGCTGGTGTCAATGCTGATGGACCGCCACGGTACCAGCCGCGTGCTGTTCCGCAATACCCGTAACGGCGTCAAAGGCTTTCCGAAACGCGAGCTGCATACGATTCGTCTGCCGCTGCCGACCCAGTACCAGACGGCCATCAAGGTTTCCGGCATTATGGGTGCCCGCAAAACGGCCGAAGAGCGCGCCCGCGACATGCTCTATCCGGAGCAGATTTATCAGGAATTTGAAGGCGATACCGGTACCTGGTGGAACTTTGACCCGCGCGTTGAATGGCTGATGGGCCATCTCACCAGCCACCGCTCGCAGAAAGTACTGGTGATCTGCGCTAAAGCAGCCACCGCGCTGCAGCTGGAGCAGGTTCTGCGCGAGCGCGAAGGCATCCGTGCCGCGGTGTTCCACGAAGGGATGTCAATTATCGAACGCGACCGCGCCGCCGCCTGGTTCGCCGAGGAAGATACCGGCGCTCAGGTGCTGCTGTGTTCTGAAATCGGCTCGGAAGGCCGCAACTTCCAGTTCGCCAGCAACCTGGTGATGTTCGACCTGCCGTTCAACCCGGATCTGCTGGAGCAGCGTATCGGTCGTCTTGACCGTATCGGCCAGGCCCACGATATTCAGATCCACGTTCCGTATCTGGAAAGAACCGCCCAGTCGGTGCTGGTGCGCTGGTATCACGAAGGTCTGGACGCGTTCGAGCACACCTGCCCGACCGGCCGTACCGTTTACGACAGCGTGCATAATGAACTGATTAACTATCTCGCCGCGCCGGAAAATACCGACGGCTTCGACGACCTGATCAAAGCCTGCCGCCAGCAGCATGAAGCGCTGAAAGCGCAGCTGGAACAGGGCCGCGATCGTCTGCTGGAGATCCACTCTAACGGCGGAGAAAAAGCCCAGCAGCTTGCGGAAAGCATTGAAGAACAGGATGACGACACCAGCCTGATCGCTTTCTCCATGAACCTGTTCGATATTGTCGGCATCAACCAGGACGACCGTGGTGAAAACCTGATTGTCCTGACCCCCTCCGACCATATGCTGGTACCGGACTTCCCTGGCCTGCCGGAAGATGGCTGCACCATTACCTTTGAGCGTGACGTCGCCCTGTCCCGCGAAGACGCGCAGTTCATCACCTGGGAGCATCCGCTGATTATCAACGGTCTGGATCTGATCCTCTCCGGCGATACCGGCAGCAGCACCATCTCGCTGCTGAAGAACAAAGCGCTGCCGGTAGGTACCCTGCTGCTGGAGCTGATTTACGTCGTTGAGGCCCAGGCGCCGAAGCATCTGCAGCTCAACCGCTTCCTGCCGCCGACGCCAGTGCGCATGCTGCTCGACAAAAACGGCAACAACCTTGCCGGTCAGGTGGAGTTCGAAAGCTTTAACCGTCAGCTGAGCGCGGTAAACCGCCACACCGGCAGCAAGCTGGTCAACGCCGTCCAGCAGGACGTCCACGCCATTTTGCAGCAGGGCGAAGGCCAGGTGGCCAAAGCGGCCCAGGCCCTGATCGACGCCGCGCGTCAAGAAGCCGACGATAAGCTTTCGGCCGAACTGTCGCGCCTTGAAGCGCTGCGCGCCGTTAACCCGAACATCCGCGATGATGAACTGGCGGCTATCGAGAGCAACCGTCAGCAGGTCATGGACGCGCTGGCGCAGGCGGGCTGGCGCCTGGATGCGCTGCGCTTAATCGTGGTCACCCACCAGTAA
PROTEIN sequence
Length: 969
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYARNDSPITRVMFNPGDTITSHEGWQLQVDEVNEENGLLAYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAINPFETEQLVICSLDFVRRSKQRLEHLCEAEWDLMVVDEAHHLVWSEDAPSREYQAIEQLAECVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQQNYRPVADAVALLLAGNKLNDAELNALSDLIGEQDIEPLLQAANSDRDDAQAARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGHLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLERTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHNELINYLAAPENTDGFDDLIKACRQQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIINGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKHLQLNRFLPPTPVRMLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEGQVAKAAQALIDAARQEADDKLSAELSRLEALRAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ*