ggKbase home page

NECEvent2014_6_5_scaffold_321_19

Organism: NECEvent2014_6_5_Klebsiella_oxytoca_55_61_partial

partial RP 19 / 55 MC: 4 BSCG 18 / 51 ASCG 8 / 38 MC: 3
Location: comp(20369..22855)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane usher protein mrkC {ECO:0000313|EMBL:EHS91672.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebs similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 828.0
  • Bit_score: 1692
  • Evalue 0.0
Fimbriae usher protein StcC similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 828.0
  • Bit_score: 1653
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2487
ATGAAGCAGAGGTCAATCTGCCCGGGAAGATTAAGCACGACGATTGCGGTTGCGCTGTGCTGCTTTCCGCCATTTTCCAGCGGACAGGAAAACCCGGGAACGGTCTATCAGTTTAACGATGGTTTTATCGTCGGTAGTCGCGAAAAGGTCGACCTGTCGCGCTTCTCGACCAGCGCTATCAGCGAGGGCGTCTATTCCCTCGATGTGTATACCAACGGCGAATGGAAAGGGCGCTACGACCTGAAAATCACCGCCGGTAAAGATGGCAAAATGGGCGTCTGCTACACCAAAGCGATGCTGATGCAGTACGGGATCTCGCCGGAAAAGTTTAACCCGCAGCTCAGCGAAAAAGAGGGATTCTGCGGACGCCTGCAGGAGTGGCGTAACGAAGATAATGTTAAAGACACGCTGATTCAGTCCTCTCTGCGACTGGATATTTCCGTACCGCAAATCTATGAAGATCAGCGCCTGAAAAACTTTGTCAGCCCGGAATTCTGGGATAAAGGCGTTGCGGCGCTGAATTTAGGCTGGATGGCGAACGCCTGGAATAGCCACACGTCGTCGAACAACGGCTCTGATAACAGCAGCGCGTACCTTGGCGTTAACGCGGGCCTGTCGTGGGACGGCTGGCTGCTCAAGCATATCGGTAACCTGAACTGGCAGCAGCAGCAGGGGAAAGCTCACTGGAACAGCAACCAGACCTGGCTGCAGCGTCCTGTTCCGCAGATTAATTCGATAGTCAGCGGCGGGCAGATTTTTACCAGCGGCGAGTTCTTCGACACGATTGGCCTGCGCGGGGTCAACCTGGCGACCGATGACAATATGTTCCCGGACGGCATGCGCTCTTACGCTCCCGAAATTCGCGGCGTAGCGCAAAGCAATGCCCTGGTGACGGTGCGCCAGGGCAGCAATATTATCTATCAGACTACGGTACCGCCGGGGCCGTTTACCCTGCAGGATGTCTATCCTTCCGGCTACGGTAGCGATCTTGAAGTATCGGTAAAAGAGGCCGACGGTTCGGTTGAGGTGTTCAGCGTACCTTACGCCTCAGTGGCGCAGCTGCTGCGTCCGGGAATGACCCGCTATGCGCTTTCTGCCGGTAAGGTCGACGATAGCTCCCTGCGTAATAAACCGATGCTTTACCAGGGAACCTTTCAGCACGGTTTGAATAACCTGTTCACCGGCTATACCGGCGTCACCGGCTTTGATGACTATCAGGCCTTTCTGCTGGGAACCGGGATGAATACCGGCATCGGCGCGCTCTCCTTCGACGTTACCCACTCGCGGCTGAAGAGCGATACCCTTGACGAGCAGGGGCAGAGCTATCGCGCCACCTTTAACCGTATGTTTACCGAAACCCAGACCAGTATCGTGCTGGCGGCGTATCGCTACTCCACCAAAGGCTACTACAACCTGAACGACGCGCTGTACGCCGTCGATCAGGAAAAGAACCACCGCAGCAGCTACACCGTATGGCGGCAGAAAAACGGGATGACGTTTACCGTTAACCAGAATCTGCCGGACGGCTGGGGCGGTTTTTACCTTAGCGGTCGGGTGGCGGATTACTGGAACCGTTCGGGAACGGAAAAGCAGTACCAGTTTAGTTACAACAACATGTACGGTCGGCTCTCGTGGTCGGTCAGCGCCCAGCGCGTCTATACCCCGGATAGCTCCGGCCACCGTCGTGACGATCGCGTTTCACTCAACTTTAGCTACCCGCTATGGTTCGGCGAAAACCGTACGGCTAACCTGACGTCAAACACCTCGTTTAATAACTCGCGCTTCGCCAGCTCGCAGATTGGGGTCAACGGTTCGCTGGATAGCGAAAATAACCTCAACTACGGCGTGTCGACAACGACCTCGACCGGCGGCCAGCACGACGTGGCGCTGAACGGCAGCTACCGTACCCCGTGGACCACGCTGAACGGCAGCTATAGCCAGGGCGAAGGGTATCGCCAGAGCGGCGTGGGCGCCAGCGGAACGCTAATTGCTCATCGGCATGGCGTCGTGTTCTCGCCGGAAAGCGGCACCACGATGGCGCTGATTGAAGCAAAAGATGCCGCAGGCGCGATGCTGCCCGGTTCGCCGGGGACCCGCATCGACAGCAACGGCTATGCCATCCTGCCGTATCTGCGGCCTTACCGGATTAACTCGGTTGAAATTGATCCCAAAGGCAGCAGCGACGACGTCGCCTTCGGCAGTACCGTGGCGCAGGTCGTGCCGTGGGAAGGCAGCGTGGTTAAGGTCTCTTTCGATACCACGGTGCAGAACAACATCACTCTGCAGGCGCGCCAGGCAAACGGCCTGCCGTTACCGTTCGCCGCCACGATATATGCCCCATCCGGGAAAGAGATTGGCGTGGTGGGCCAGGGCAGCATGATGTTTATCAGCGACGCCAGCGCGCCGCAGGCTACGGTCAAATGGAGCGGTGGACAGTGTTCGGTAGAGTTAAGTCAGCAAAAAACAAAGGAAACGCTATGTCGCTAA
PROTEIN sequence
Length: 829
MKQRSICPGRLSTTIAVALCCFPPFSSGQENPGTVYQFNDGFIVGSREKVDLSRFSTSAISEGVYSLDVYTNGEWKGRYDLKITAGKDGKMGVCYTKAMLMQYGISPEKFNPQLSEKEGFCGRLQEWRNEDNVKDTLIQSSLRLDISVPQIYEDQRLKNFVSPEFWDKGVAALNLGWMANAWNSHTSSNNGSDNSSAYLGVNAGLSWDGWLLKHIGNLNWQQQQGKAHWNSNQTWLQRPVPQINSIVSGGQIFTSGEFFDTIGLRGVNLATDDNMFPDGMRSYAPEIRGVAQSNALVTVRQGSNIIYQTTVPPGPFTLQDVYPSGYGSDLEVSVKEADGSVEVFSVPYASVAQLLRPGMTRYALSAGKVDDSSLRNKPMLYQGTFQHGLNNLFTGYTGVTGFDDYQAFLLGTGMNTGIGALSFDVTHSRLKSDTLDEQGQSYRATFNRMFTETQTSIVLAAYRYSTKGYYNLNDALYAVDQEKNHRSSYTVWRQKNGMTFTVNQNLPDGWGGFYLSGRVADYWNRSGTEKQYQFSYNNMYGRLSWSVSAQRVYTPDSSGHRRDDRVSLNFSYPLWFGENRTANLTSNTSFNNSRFASSQIGVNGSLDSENNLNYGVSTTTSTGGQHDVALNGSYRTPWTTLNGSYSQGEGYRQSGVGASGTLIAHRHGVVFSPESGTTMALIEAKDAAGAMLPGSPGTRIDSNGYAILPYLRPYRINSVEIDPKGSSDDVAFGSTVAQVVPWEGSVVKVSFDTTVQNNITLQARQANGLPLPFAATIYAPSGKEIGVVGQGSMMFISDASAPQATVKWSGGQCSVELSQQKTKETLCR*