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NECEvent2014_6_5_scaffold_4518_2

Organism: NECEvent2014_6_5_Clostridium_botulinum-rel_29_16_partial

partial RP 9 / 55 BSCG 8 / 51 ASCG 2 / 38
Location: comp(354..926)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB14408.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples. similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 189.0
  • Bit_score: 272
  • Evalue 6.00e-70
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 190.0
  • Bit_score: 212
  • Evalue 8.70e-53

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Taxonomy

Clostridium sp. CAG:221 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGAGAAAGTATTTTCTTTACCTTTTAAAACAAAAGAAAAAGATTCATTAGAAATAACTCTTGTTAATAAAGCCAAAAAGGGTGACCCAGAATCATTTACAGAATTATATAAGATTTATAAAGTTTATCTTTACAAAATAGCATATAGCTATGTTAAGGATGAGAATAAAGCATTAGATATATTACAAGAATGTGCTTATAGAGGCTTCTTAAATATTGCTAAAATTAAAAAACCTATTTTTTTTAAGACTTGGATAACAAGGATTTTAATAAATGTAGCTATTGATTACCTAAAAAAAGACAGTAAAATTATATACTTAAACAATGATATCCCCATGGCATCTAGTAAAGAAAAAATATCTATAGAAGAAAAAATAGACTTATACAATGCTATTGATACGTTAAGAGAAAAATATAAAACTGTCATTATTCTAAAATACTTTAATAATATGAGCATTCAAGATATTTCATATATCATGGGTATACCAATAAATACAGTTAAAAGCCATTTAAGAAGAGCAAAAGAAGAATTAAATAATACTTTAAAGGAGGGATATTTAGATGAATTTTAA
PROTEIN sequence
Length: 191
MEKVFSLPFKTKEKDSLEITLVNKAKKGDPESFTELYKIYKVYLYKIAYSYVKDENKALDILQECAYRGFLNIAKIKKPIFFKTWITRILINVAIDYLKKDSKIIYLNNDIPMASSKEKISIEEKIDLYNAIDTLREKYKTVIILKYFNNMSIQDISYIMGIPINTVKSHLRRAKEELNNTLKEGYLDEF*