ggKbase home page

NECEvent2014_6_5_scaffold_2476_1

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: 1..2196

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 732.0
  • Bit_score: 1444
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 732.0
  • Bit_score: 1439
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2196
ATGGTACATCCTGTCCAAGTTGGCAAAAGGACTCGTATGAGCTTTTCTAGGCTTAAAGAGGTTGGGCAAATGCCAAATCTTATAGAAGTTCAGTTAGACTCATATGATTGGTTTTTAAAAGAAGGGTTACAAGAAGTTTTTGACGATATTAACCCGATTCAAGATTATACAGGTAATCTAAATTTAGAATTTGTAGGCTACAAACTAGATTTAGATAGTATTAAATACTCTGTTGAAGAGTGCAAAGAAAGAGATTCTACTTATGCAGCACCATTAAAAGTAAAAGTTAGACTTTTAAATAAGGAAACTGGTGAAATAAAAGAACAAGAAGTTTTTATGGGAGATTTCCCTTTAATGACAGAACAAGGAACTTTTATAATAAACGGTGCAGAAAGGGTTATAGTAAGCCAATTAGTTAGATCACCAGGGGTTTATTATGACATGACTGTAGATAAAACAGGAAGCAAATTATTCTCAGCTACAGTTATACCTAACAGAGGTGCATGGTTAGAATATGAAACAGATTCGAATAACATAATATATGTAAGAATTGACAAAACACGAAAATTACCAATTACTATATTAGCAAGAGCATTAGGTTATGGAACAGATGCTGAAATAATAGAATTCTTCGGAGAAGATGAAAGATTAAAAGCCACAATAGAAAAAGATAATACAAAGACTAGAGAAGAGGCTTTACTTGAAATATATAAAAGATTAAGACCAGGTGAACCACCTACTGTGGATAGTGCAGAATCTTTAATTGAATCTTTATTCTTCGATGCTAAAAGATATGATTTATCAAGAGTTGGAAGATATAAATTTAATAAGAAATTAGCAATCCATCTAAGAATAACAAATCAAATTGCAGATCAAGATATAGTTAATCCACAAACAGGAGAAATTTTAGTACAAAAAGGTGAAAAAATAGATAAAGATAAGGCTATTGAAATACAGAACTGTGGTATTAACGAAGTATATATAAAAATAGATGATAAGTCATTTAAAGTAATTGGCAATCACTTTGTAGACATACATAGTTTGGTTTCATTCGATATAAGTGATTTAAATATTAAAGAATATGTATTCTATCCTGTTTTAAAAGAAATACTAGATAATTATGCTGATGAAGAAAGTATAAAAGAAGAAATAAGAAAGAATATATATAGATTAATTCCTAAACATATTATAAGAGAAGATATATATGCTACCATAAATTATGAATTAGGATTAAGTTATGATATTGGTTATAAAGATGATATAGATCATTTAGGAAATAGAAGATTAAGATCAGTAGGAGAATTATTACAAAATCAATTTAGAATTGGTTTATCTAGAATGGAAAGAGTTGTTAAAGAAAGAATGACAATTCAAGATCAAGAAGTAATAACTCCTCAAGCTCTAATAAATATCAGACCTGTAGCAGCGTCCATTAAAGAATTTTTTGGTAGTTCACAATTATCACAATTTATGGATCAAACAAACCCTCTATCAGAATTAACACATAAAAGAAGGTTGTCAGCTTTAGGACCAGGAGGACTTTCAAGAGAAAGGGCCGGTTTTGAAGTAAGAGACGTTCACCATTCACATTATGGAAGAATGTGTCCTATAGAAACTCCAGAAGGACCAAACATAGGGCTTATAAATTCTTTAGCTACTTTTGCTAAGGTTAATGAATATGGATTTATAGAAACACCTTATAGAAGAATAGATCCTAAAAATAAAAGAGCTACAAATGATATAGTATATATGACAGCGGACGAAGAAGATTTATATGTAATAGCTAGATCAGATGAGCCAATTGATGAAAAGGGATATTTTTTAGATGATAAAGTTACAGTTAGGGCTAAAGAAGAAGTTTTAGTTGTTCCAGTTAGCGAAGTTGAGTATATGGATATATCACCAAGACAATTGGTTTCTGTTGCAACTGCAATGATACCATTCCTTGAAAATGATGATGCCAGCCGTGCACTTATGGGATCAAACATGCAACGTCAAGCAGTACCACTATTAAAGCCACAGGCTCCAATAGTTGGAACAGGTATAGAATATAAAGCTGCAACGGATTCAGGGGTTCTTCCAAAGGCTAAAAATGCAGGGACAGTAGTATATGTTTCAGCAGATGAAATAAGAGTAAGAAGAGATAGCGATGGAGGAATAGATAAATATAAGTTATTAAAATTCAAAAGATCTAAC
PROTEIN sequence
Length: 732
MVHPVQVGKRTRMSFSRLKEVGQMPNLIEVQLDSYDWFLKEGLQEVFDDINPIQDYTGNLNLEFVGYKLDLDSIKYSVEECKERDSTYAAPLKVKVRLLNKETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYDMTVDKTGSKLFSATVIPNRGAWLEYETDSNNIIYVRIDKTRKLPITILARALGYGTDAEIIEFFGEDERLKATIEKDNTKTREEALLEIYKRLRPGEPPTVDSAESLIESLFFDAKRYDLSRVGRYKFNKKLAIHLRITNQIADQDIVNPQTGEILVQKGEKIDKDKAIEIQNCGINEVYIKIDDKSFKVIGNHFVDIHSLVSFDISDLNIKEYVFYPVLKEILDNYADEESIKEEIRKNIYRLIPKHIIREDIYATINYELGLSYDIGYKDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVKERMTIQDQEVITPQALINIRPVAASIKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLATFAKVNEYGFIETPYRRIDPKNKRATNDIVYMTADEEDLYVIARSDEPIDEKGYFLDDKVTVRAKEEVLVVPVSEVEYMDISPRQLVSVATAMIPFLENDDASRALMGSNMQRQAVPLLKPQAPIVGTGIEYKAATDSGVLPKAKNAGTVVYVSADEIRVRRDSDGGIDKYKLLKFKRSN