ggKbase home page

NECEvent2014_6_5_scaffold_3143_3

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(1006..1599)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator {ECO:0000313|EMBL:EHN15269.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogen similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 388
  • Evalue 7.80e-105
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 27.1
  • Coverage: 199.0
  • Bit_score: 94
  • Evalue 4.70e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCTAAAGAAAAAAAATATCAAATTAGAAACGAAAAAATTATTGAAACAGCCGAAAAGTTGATAAAGCAAAAGGGGTATCATCATTTTAAAATGAGTGATATATCTGATGAGTTAGACATTGGGAAAGGGACTATTTATAATCATTATCCCTCTAAAGAAGATTTGCTTTTTACACTTATATATCCAAAACTGCAAAAACTGCAAAATTGCTTGAGACAAATTTCTGAAAGCAATATCTCCTTTGAAGAAAAAATTCGTAAAGTAATTCATGAAGTGATAGAAAGTGATTACCATCAGTTTTTATTATTAAGTTATTCTGATATTGCTGCTCTTTTTCAAGAGAAAAATCAAAAAGATATGGAGTTAATTCAAGACCAAATTATACAGGAGTTTAAGAATATTATAGCTTTAGGGATAAATGAGGGAATTATAAGTCAAGAATTTTCAATAGATTTTTTAAGCCATCAGATTCTCTCTGCACTGAATCCTTTACTGCACAGTCTTCTTGTTACTGATTCTGCCAAAATGACACATGACGAGTTTATAAAACAAACAGTAGAAATCCTATTATATGGTATTAAGAAAGGATAA
PROTEIN sequence
Length: 198
MSKEKKYQIRNEKIIETAEKLIKQKGYHHFKMSDISDELDIGKGTIYNHYPSKEDLLFTLIYPKLQKLQNCLRQISESNISFEEKIRKVIHEVIESDYHQFLLLSYSDIAALFQEKNQKDMELIQDQIIQEFKNIIALGINEGIISQEFSIDFLSHQILSALNPLLHSLLVTDSAKMTHDEFIKQTVEILLYGIKKG*