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NECEvent2014_6_5_scaffold_3198_1

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(2..1576)

Top 3 Functional Annotations

Value Algorithm Source
Sensory box sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:EHN14991.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 509.0
  • Bit_score: 990
  • Evalue 7.00e-286
sensory box sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 509.0
  • Bit_score: 979
  • Evalue 3.30e-283

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1575
CTATACAGAAATCTATATTATATTTATGGTACATTGGAGGAATATAAGATGAATAGTTCTATAGAATTAATTTACACTGTAAAAAATGTAATGAAGACAGATTTTATAAAAGTACTTAAAAATGAAGCCATATCATCTGCCTTCAATAGAATGGCTAAACTTTATAAAGATGAAGTTCTTATAGTAGATGAGGATGACAATATTATAGGTATATTTACTAAAAATGACTTATATAAATTGGAAAATGAAGGTAAAAGATTTAGTGATAACTTAGAAAATTATATAAAAAGAGATGTAATAACAATTTCTGAAGAAAAATCAATTATTTCTGCAAGAAATATAATGGTTAAAAATAAGATAGAAAGATTACCTATAGTACATAATAGAAAAATAATAGGGATAGTACATTTAGATGATTTAAATAATGAATTATACACAAATGTAGAAGAATTATATGCTCTTCAGGATAGAATTTTAGAAAATATGCATGAAGCAGTATGTATAACAAATAACAAAGGTGTAGTAATATATTGGAATAAAAGTTCTGAAGATTTATATGGAGTGAAGAGGCAGGAGATAATAGGCCAATATTTAGGATCTTTTTTCCCAAATGCTTTAATATTAAAGGTTTTGAAAAAGCCTAGAAAAATAACTAATGTAAATAATGAGCCTTCTCCTGGAAAAACTGTTATATTAAGCGCGGTGCCTATATTTAATAGTAAAAATAAATTAATAGCAGTAGCTTCTACAGATAGGGATATAACAGAGGTAATATCTTTATCTAAAGAACTTATGCAGGAAAAAAAGAAGGTAGAATTCTTTGAAAGTGCCTATAAAAAAGAAATAGCTTCAAATTATAGTTTTTCCTCTATTATAGGTAAGAGTCAAAGGATAATAGAAAACATTGCTATAGCTAAAAAAGTAGCACCTACCTCTGCTAGTGTTCTTATTACAGGAGAAAGTGGAACAGGAAAAGAAGTTTTTGCAAAGGCTATACATAAAGCTAGTGGAAGAACTGGAAATTTTGTAGCTATAAATTGTAGCGCCATACCTGAAAATCTTTTTGAAAGTGAATTGTTTGGTTATGTGGGAGGAACTTTTACAGGTTCATTAAAAGAAGGGAAAATAGGTAAATTTGAATTTGCTAACAATGGAACCTTATTTTTAGATGAAATAGGGGACATGCCACTTAGTATGCAGGCTAAACTTTTAAGAGTTTTACAGGATGGTGTGGTTTACAGAATAGGAAGTCAAAAGGGTACAAAGGTTAATTGTAGAATTTTAGCTGCCACTAATAGGGACTTACAATCTATGATAAAGGAAAATACCTTTAGAGAGGATCTATTTTATAGATTTGCAGTAGTGCATATAGAGTTACCTCCATTAAGAGAAAGAAGAGATGATATTAAGGATTTTATAGATTTGTTTATAAACCAAATATCAGAAAAGGAAGGTATAAAGATAAATTCAATAGATAAAGAGGTTTATAATATTTTATGCTCTTATAAATGGGAAGGAAATATAAGGCAATTAAAAAATGTAGTAGAGAGAATGGTGGTTTTATCAACCAATGGA
PROTEIN sequence
Length: 525
LYRNLYYIYGTLEEYKMNSSIELIYTVKNVMKTDFIKVLKNEAISSAFNRMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENEGKRFSDNLENYIKRDVITISEEKSIISARNIMVKNKIERLPIVHNRKIIGIVHLDDLNNELYTNVEELYALQDRILENMHEAVCITNNKGVVIYWNKSSEDLYGVKRQEIIGQYLGSFFPNALILKVLKKPRKITNVNNEPSPGKTVILSAVPIFNSKNKLIAVASTDRDITEVISLSKELMQEKKKVEFFESAYKKEIASNYSFSSIIGKSQRIIENIAIAKKVAPTSASVLITGESGTGKEVFAKAIHKASGRTGNFVAINCSAIPENLFESELFGYVGGTFTGSLKEGKIGKFEFANNGTLFLDEIGDMPLSMQAKLLRVLQDGVVYRIGSQKGTKVNCRILAATNRDLQSMIKENTFREDLFYRFAVVHIELPPLRERRDDIKDFIDLFINQISEKEGIKINSIDKEVYNILCSYKWEGNIRQLKNVVERMVVLSTNG