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NECEvent2014_6_5_scaffold_3278_1

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(2..625)

Top 3 Functional Annotations

Value Algorithm Source
TrkA-C domain protein {ECO:0000313|EMBL:AJD32697.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 413
  • Evalue 2.40e-112
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 208.0
  • Bit_score: 394
  • Evalue 1.80e-107
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
ATGGAAAATACAGATACTCCCAAATATATGAAAATAGCAATAGATATAGCTCAAAATATTTATAATAATGAATTTAAGGTAGGGGAAAAAGTTAGAGGAAGATCCACACTCTCAAGTAAATATAATGTATCTCCAGAAACTATAAGAAGAGCTGTTTCATTGCTTAAGGATATGCAGGTAGTAGAGGTAACAGAAAAAAGTGGTATATATATTAAATCCGTTGAAAATGCATACTTGTTTATACATAGATTTAATGCTAAAAACAATGTTAAAGAACTTAGACAAAAAATAAAGTCTCTTCAAAAGGAAAAGGTTAAAATTGAAAAGGAAATAGATAAATATATGGATTTAATTTTGGAAAATTCTATTCAATTTGAAAATATAAATTTAGAAGATTCTTATGAAATGGTTATATATTCAAATTCTTATATAGTAAATAAGACTATTTCTGATACAGAGTTTTGGAAGCATACCAATGGTACTATAATATCTGTAAAGAGAAAGGATAAGATGTATATATCCCCAGGACCTTATTTTAGATTTGAAGCAGGGGATATTGTAAGAATCATATGTAGCGAAAATGATTTAAATAGAGCCAAAAATTATATACAGCAGGGAATAAAC
PROTEIN sequence
Length: 208
MENTDTPKYMKIAIDIAQNIYNNEFKVGEKVRGRSTLSSKYNVSPETIRRAVSLLKDMQVVEVTEKSGIYIKSVENAYLFIHRFNAKNNVKELRQKIKSLQKEKVKIEKEIDKYMDLILENSIQFENINLEDSYEMVIYSNSYIVNKTISDTEFWKHTNGTIISVKRKDKMYISPGPYFRFEAGDIVRIICSENDLNRAKNYIQQGIN