ggKbase home page

NECEvent2014_6_5_scaffold_4668_1

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: 3..554

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 366
  • Evalue 3.00e-98
rpsD-1; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 183.0
  • Bit_score: 359
  • Evalue 4.30e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
TTAGGAGTAAATATTTATGGACATCCTAAGGCTATGAAAAGAGCCACAAGAGAAAACAGTAGGGAAGGTAAAAAATTATCAAATTATGGTAAACAACTTTTAGAGAAACAAAAGATAAGATCCTACTATGGAGTTTTAGAAAAGCAATTTTTAAGATATGTTAAAAAAGCTATGAAAAGTAAAGAAAGAACTGGAGACGTTTTACTAAGAAGCCTAGAATGTAGATTAGACAATATAGTATATAGAATAGGATTTGCTAATTCTATAAGACAAGCTAGACAAATGGTGAATCATGGACATATATTAGTTAATGGGAGCAAAGTCAACATACCATCCTATGGAGTAAAAACAGGAGATGTAATAACTCTAAGGGAGAAGTATAGAAAAAATGATGAGTTTGCTGATAATTTCTTAGCTTTAAAAAAATTTACTCTACCATATATAGAAAAGGATTATGATAAATTTTCAGGTGTATTAATTAAAGAACCTGAAAGAGATGAAATACCAATAGATGCAAATGAAACTCTAGTAGTAGAATTATATTCTAAATAG
PROTEIN sequence
Length: 184
LGVNIYGHPKAMKRATRENSREGKKLSNYGKQLLEKQKIRSYYGVLEKQFLRYVKKAMKSKERTGDVLLRSLECRLDNIVYRIGFANSIRQARQMVNHGHILVNGSKVNIPSYGVKTGDVITLREKYRKNDEFADNFLALKKFTLPYIEKDYDKFSGVLIKEPERDEIPIDANETLVVELYSK*