ggKbase home page

NECEvent2014_6_5_scaffold_4813_2

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(124..666)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 180.0
  • Bit_score: 349
  • Evalue 3.70e-93
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 180.0
  • Bit_score: 348
  • Evalue 9.70e-94
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCAAGAGTAGGAAAACTTCCAGTAGCTATCCCTAATGGAGTAACTGTTACAGTAACACCAGATAACGTTGTTACTGTAAAGGGACCAAAGGGAGAGTTAGTAAAAGCTATGAGTAACAAAATAAACATAGCTGTAGAAGATAATTCAGTAGTTGTAACTAGAGACAATGATCATAAAGATGTAAGAGCTCTTCATGGTTTAACAAGAGCTTTAATAAACAACATGGTAACAGGAGTTAATGAAGGATACGTTAAAACATTAGAATTAATAGGTGTTGGTTATAGAGCGCAATTACAAGGAAAGAAATTAGTACTTAGCCTTGGATTCTCACATCCAGTTGAAATGGAAGCAGTTTCAGGAGTAGAATTTGAAGTTGAAGGTGGAACTAAGGTAAAAGTTAAAGGTATAGATAAGGAATTAGTAGGTGCTGTAGCAGCAGACATAAGAAAATGGAGAAAACCTGAACCTTACAAAGGAAAAGGAATTAAATACGAAAATGAAGTTATAAGACGTAAGGAAGGTAAGACTGGTAAGAAATAA
PROTEIN sequence
Length: 181
MSRVGKLPVAIPNGVTVTVTPDNVVTVKGPKGELVKAMSNKINIAVEDNSVVVTRDNDHKDVRALHGLTRALINNMVTGVNEGYVKTLELIGVGYRAQLQGKKLVLSLGFSHPVEMEAVSGVEFEVEGGTKVKVKGIDKELVGAVAADIRKWRKPEPYKGKGIKYENEVIRRKEGKTGKK*