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NECEvent2014_6_6_Clostridiales_50_23_scaffold_30_1

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1..558

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B50F6B similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 183.0
  • Bit_score: 196
  • Evalue 2.90e-47
recombinase; K04763 integrase/recombinase XerD Tax=RBG_13_Deltaproteobacteria_43_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 183.0
  • Bit_score: 196
  • Evalue 2.40e-47
tyrosine recombinase xerD similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 192
  • Evalue 9.10e-47

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Taxonomy

RBG_13_Deltaproteobacteria_43_22_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTTGAAGAGGTGACAAGGCTTTTACAGGCCCCTGATGCATCAACCATGCCGGGGCTGAGAGATGCGGCTATCTTAGAATTGCTTTATGCAACAGGTATGCGGGTCAGCGAGTTATCCGCTTTAGAGTTGCACCAAATTTTACCGGAAGAACAACTGGTTCGCGTTTTTGGTAAAGGACATAAAGAGCGTTTGGTCTTTTATGGAGATGCCGCAAAATCCGCCTTGGAAAATTATATGATGAAGGGCCGCTCGAAACAAAAAAACGCACGAAAAAGTCCCTATGTTTTTTTAAACAATAGGGGGGGCCCCTTATCGCGCCAAAGCATCTGGAAAATGATAAAGCGTTACGGCCAACAAGCCGGATTGCCGGTGAGTCAACACTTATCGCCGCATACGCTGCGTCATTCATTTGCTAGCCATCTATTGGCCGGCGGAGCTGATTTAAGGTTGATACAAGAGCTCTTGGGGCATGCCGATATTTCAACGACACAAATCTACACCCACATTGCAGATGATGCCGTATTGGCCCAGTACAGAGCGGCACATCCGCGTGGATAG
PROTEIN sequence
Length: 186
VEEVTRLLQAPDASTMPGLRDAAILELLYATGMRVSELSALELHQILPEEQLVRVFGKGHKERLVFYGDAAKSALENYMMKGRSKQKNARKSPYVFLNNRGGPLSRQSIWKMIKRYGQQAGLPVSQHLSPHTLRHSFASHLLAGGADLRLIQELLGHADISTTQIYTHIADDAVLAQYRAAHPRG*