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NECEvent2014_6_6_Clostridiales_50_23_scaffold_37_3

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1926..3296)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulatory protein GabR n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2IZU7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 449.0
  • Bit_score: 347
  • Evalue 1.50e-92
  • rbh
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:ERJ79501.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptos similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 449.0
  • Bit_score: 347
  • Evalue 2.10e-92
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 448.0
  • Bit_score: 322
  • Evalue 2.50e-85

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Taxonomy

Peptostreptococcaceae bacterium oral taxon 113 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1371
TTGCTTACAATCGCTCGAAAAGGCTGCATTTATGAACAAATTTATGAACAGTTGCGCAATAGCATCATTACGAATCAATTGAAAAGCAATGCCAAGCTGCCCTCTAAACGCAGCTTGGCAGCTACCTTAAATGTATCCGTCAATACCGTTGAACACGCCTACCACAAGCTCCTGGACGAAGAATTCGTTTATACAAAAAACCGGTCCGGTTTTTACGTCAACACCTTAGACCACGCCTTCTTCCGAAAAAATCGTCCGGTCACCTTCACTGAAGATCCAGAAGAAAGGCAGCGACCTTACATCTATGATTTTTCGCATCTTGGCGTTGATCGAGAAAATTTTCCCTATTCCGTTTGGAAAAAAATAAGCAATGAAATCCTCTTGGACCACGAAGACCGCTTGTTAACAACGGGGCATTATCAAGGGGAATACGAATTGCGGCAAGAAATTGCTCATTTTTTAGCGGACAGTCGATCCATCCAAGTGCATCCGTCATCAATTATCATTACGTCAGGCTTGGAATATTCTTACCTGATTTTATTTCAATTGCTGGGTGACTTAAATTTTGGGATAGAAAATCCCAGCTTTGAACGATTGGAGCGCTTGTTTTTCTCGCATAAAATCCGGTACACCTACATTCATTTGGATGAACAGGGCGCCGTCCCGGATGAAACCATCAGCCCCATTGACGTCTTAACCCTTACCCCCTCCCATCAATTTCCGACCGGCCGCATCATGCCCTTACAAAGACGAATGGATTTCCTTAATATTGCCAACGCCAGTAAAAAATGGATTATTGAAGACGACTATGATGGAGAATTTAAGTATAGCGGGGCCCCCATAGCGCCTTTGAAAGCCATGGACATCTACGACCGGGTCATCTACCTGGGCAATTTTTCAAATACCATTTTTCCCAGCTTACGCCTGTCCTACATGATCCTTCCAGATAAGCTGCGCATTCGTTATCAAAAAAACTACGCCCTTAAATGTTCGGTCCCCTTGCTCACACAGCTCAGCACGGCAAAATTTATTGAAAGCAGCGCTTTTATCCGACATTTAAACCGGATGAAGCGCGTATACCGGTACAAACGAAATTTAATCCTATCCTTTTTTAAAGACATCCCCTCTGTCTCTTTAGAAGAGAGCGATGCCGGCCTCTTTATGATTTTAAAAGTAACAACGCCCTTATCGGAAGAGGAGCTCTGTAGACGGGCCGAAGGCAGTGGCATCCTCATTCGGCCGCTTACCTATTTTGAAACGACCGGCACTGAATTCAGCAAGCACTTCCTGCTCTCTTTTTCAAGCATTGAAACGTCACGTCTTTTGGAGGCCCTAAAGGCGCTGGCCGCCGCATGGGCCCTGACCGACTAA
PROTEIN sequence
Length: 457
LLTIARKGCIYEQIYEQLRNSIITNQLKSNAKLPSKRSLAATLNVSVNTVEHAYHKLLDEEFVYTKNRSGFYVNTLDHAFFRKNRPVTFTEDPEERQRPYIYDFSHLGVDRENFPYSVWKKISNEILLDHEDRLLTTGHYQGEYELRQEIAHFLADSRSIQVHPSSIIITSGLEYSYLILFQLLGDLNFGIENPSFERLERLFFSHKIRYTYIHLDEQGAVPDETISPIDVLTLTPSHQFPTGRIMPLQRRMDFLNIANASKKWIIEDDYDGEFKYSGAPIAPLKAMDIYDRVIYLGNFSNTIFPSLRLSYMILPDKLRIRYQKNYALKCSVPLLTQLSTAKFIESSAFIRHLNRMKRVYRYKRNLILSFFKDIPSVSLEESDAGLFMILKVTTPLSEEELCRRAEGSGILIRPLTYFETTGTEFSKHFLLSFSSIETSRLLEALKALAAAWALTD*