ggKbase home page

NECEvent2014_6_6_Clostridiales_50_23_scaffold_63_3

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1853..2929)

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJT5_SYNLT similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 354.0
  • Bit_score: 464
  • Evalue 1.10e-127
  • rbh
peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 354.0
  • Bit_score: 464
  • Evalue 3.10e-128
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 354.0
  • Bit_score: 464
  • Evalue 1.60e-127
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophothermus lipocalidus → Syntrophothermus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1077
ATGTTTGAACAACTTCCTGCATTAGATAAACGTTTTGAAGAGCTTAATCTGGCCATGGCCGACCCGGCCCTCCTGGCCAATCAAGAGGAATTTCGCAAAACCGCTATAGCCCGTGCCGACCTTGAAGATGTGGTGATGGCCTGGCGGGCTTACAGCGCCTTATTGAGTGAAAAAGAAGATACCAAAGAAATTATTGAGGCTGAAGACGATCCGGACATGGTCGAAATGGCCAAGGAAGAATTGCACAGCTTGAACGATCAGATTCAGGCCTTGGAAGAAAAAATAAATGTCCTGCTCTTGCCCAAGGATCCCAATGATGAACGCAACGTTATCATGGAAATTCGCGCCGGTACCGGTGGGGATGAGGCGGCTCTCTTTGCCAGCGATCTTTTCCGGATGTATGCCAGGTATGCAGAGGATTGCGGCTGGAAAGTGGACATTATGAACTCTAACATGACCGATGGCGGTGGTTATAAAGAAATTACCTTTATGATTGTCGGCAAGGGGGCCTATTCAAAATTGAAATTTGAAGGTGGCGTTCATCGGGTGCAGCGGGTTCCGGCAACGGAAAGCGGTGGCCGTATTCATACCAGCGCGGCAACGGTTGCTGTGCTGCCGGAAGCTGAAGACGTGGAAGTGGACTTAGATATGAACGATGTGCGCGTAGACGTCTTTTGCTCCTCCGGGCCGGGCGGGCAGAGTGTTAACACCACCCAGAGCGCTGTCCGCGTCACCCATGAACCGTCCGGGATTGTGGTCAGCTGCCAGGATGAAAAATCCCAGCAGATGAACAAGGAAAAGGCGCTGAAAGTGTTAAAAAGCCGCCTTTATGAAAAAGTAATGGCCGAACAGCACGGCGCGGAAGCCGAAGCCCGTCGGTCCATGATCGGCTCCGGAGACCGGAGCGAACGGATCCGCACCTATAACTTTCCCCAAGGTCGGATCACCGATCACCGGATTAACTTGACCCTACATAAGTTGGACCAGGTATTGGATGGTCATCTGACCGAGCTGATTGATGCCTTGGTTTCCACCAACCAGGCGCGCCAACTGGATGAGGCAGCCCGTGACCTCTAA
PROTEIN sequence
Length: 359
MFEQLPALDKRFEELNLAMADPALLANQEEFRKTAIARADLEDVVMAWRAYSALLSEKEDTKEIIEAEDDPDMVEMAKEELHSLNDQIQALEEKINVLLLPKDPNDERNVIMEIRAGTGGDEAALFASDLFRMYARYAEDCGWKVDIMNSNMTDGGGYKEITFMIVGKGAYSKLKFEGGVHRVQRVPATESGGRIHTSAATVAVLPEAEDVEVDLDMNDVRVDVFCSSGPGGQSVNTTQSAVRVTHEPSGIVVSCQDEKSQQMNKEKALKVLKSRLYEKVMAEQHGAEAEARRSMIGSGDRSERIRTYNFPQGRITDHRINLTLHKLDQVLDGHLTELIDALVSTNQARQLDEAARDL*