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NECEvent2014_6_6_Clostridiales_50_23_scaffold_117_4

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2487..3320

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1629719 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 260.0
  • Bit_score: 155
  • Evalue 9.20e-35
mfd; transcription-repair coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 247.0
  • Bit_score: 138
  • Evalue 2.30e-30
Transcription-repair-coupling factor n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LLL5_THEPS similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 247.0
  • Bit_score: 138
  • Evalue 8.30e-30

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Taxonomy

Clostridiaceae bacterium BRH_c20a → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 834
ATGAGCACCCAATCGGTGACACTGACGAACTTAATCTGTCTGCCCCAGTTGCCGACGTACGGCGAAAAAATCACCTATAGTGGTCTGGAAGATGAGGTGCGGGCCTTGGTTATGGCCGCAGCCATCAACCGCCAAGCTGGGCCGGTGCTTATTTTGTGTGCCTCGGAAAAACGGGCCAAAAGTCTGCGCGACCTACTGGAGCCCTTGACCCAGCGCCCGGTAGAGCTTTTTTTGCCCATGGAGGCCATTGCCTTTGAAGTGTTGGCGCAAAGCCGGGAAGTGGCCAATGCGCGCGTGCGCATTTTATCGCAGGTCAGCCAGAAGGGCTATAATGGCATCATTATTGCGACCCCGGATGCCTTGAAAGCGCGTTTGATGCCCTGCGCTGACTGGATGGCACACAGCACTACCTTGGCCGTTAACGCAGATATTGACCTGAAAGCCTTAATGGCCTCTTTTGTCGAGAAAGGCTACCGCCATCAGCCGGTGGTGGAACAGACTGGTGAGTTTTCTTTGCGAGGTGGGATTCTAGACGTTTTTTCACCGCTTTATGAGGAACCGATCCGGATTGAGTTCTTTGATACGGAAATTGATTCAATGCGCTTCTTTGATCCGCGCGATCAGCGCTCTGTTAAATCGGTGGAAGAAGTTGTGCTGACGCCGGCCAGAGAGGTTTTTGTCGATTCTAACTTGGCAGCAAGGTGGACAGAGCGCATCAAAGAGGCGGAAAAAGACCTGGTGCAACAATTTAACGGCAAAACTGAAAAACAGGCTGCACAAAATTTAAGAGCGCGTTTGGCCCCCGTTTACGCGGCCCTCAAATCAGCCAATGCC
PROTEIN sequence
Length: 278
MSTQSVTLTNLICLPQLPTYGEKITYSGLEDEVRALVMAAAINRQAGPVLILCASEKRAKSLRDLLEPLTQRPVELFLPMEAIAFEVLAQSREVANARVRILSQVSQKGYNGIIIATPDALKARLMPCADWMAHSTTLAVNADIDLKALMASFVEKGYRHQPVVEQTGEFSLRGGILDVFSPLYEEPIRIEFFDTEIDSMRFFDPRDQRSVKSVEEVVLTPAREVFVDSNLAARWTERIKEAEKDLVQQFNGKTEKQAAQNLRARLAPVYAALKSANA