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NECEvent2014_6_6_Clostridiales_50_23_scaffold_142_9

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 4653..5531

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3L5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 286.0
  • Bit_score: 239
  • Evalue 4.80e-60
LysR substrate binding domain protein {ECO:0000313|EMBL:EFB91132.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 286.0
  • Bit_score: 239
  • Evalue 6.70e-60
putative LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 279.0
  • Bit_score: 211
  • Evalue 3.90e-52

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Taxonomy

Pyramidobacter piscolens → Pyramidobacter → Synergistales → Synergistia → Synergistetes → Bacteria

Sequences

DNA sequence
Length: 879
ATGGATTCCATTAAAGTACGCGCCCTCTTGGAAACAATTTCCGCCGGTCGTTTGGCCAAGGCGGCCGAGGCCTTAGGCTACACGCCGTCCGGCATGAGCCGGATGATTGCCGCCTTGGAAAAAGAACTGGGGCTGACTCTTTTATTGCGAGACCGCAGTGGCGTAGCGCCGACAGCCACCTGCCGAGACCTCTTGCCGGCCTTTCGTGGCCTCTTGGCGGCGGATGATGCGGCGGAAGAGGCAGTCCGGCAGGTGCAGGGGCTTTCAGCGGGCCGACTCACCGTCGGCGCGGCCTATTCACGTTTCTACCCCCTCCTGTCCAAGGCCATTGCTGATTTCAGTCGACAGCATCCGGGGGTTAATGTTGAGTTTATTGAAGGGACCTCCAGTGATTTGGCCCATGCGGTGGCAGACCATCAGGCCGATTTCTGCATCATCAGCAAGCGCCTGGGCGATTTTGATTGGCAGCTGCTCTTAGACGATGAACTGATTGCCCTGGTGCCGAAAAACCACCCCTTGGCGGCAAAGCCCTATATGCTGGCAGAGGATTTTTTATCCGAACCCTTCATTACCATCTACCCCTCTCAAGAAACGGACAATTCACGTTTTTTTGCCAAGCACGGCATTAAGCCGCCGGAAGGCTACGGCACAGCCGATGTCCTCGCCGCAGTCCATATGGTCGAGGCGGGGCTGGGCTTGACCCTGGTTAACGGCATCCTGGTAGCCCAAATTCAAGATGTCCAGGTCGAAAAAAAACCTCTTTTGCCGGCCGCATCGGTCCCCATCGGGGTAGCGGTGACAAAAGAGGCAACGCGGTCGCCGGCGGCAGAAGCCTTCTGCCGGGCCTTCTTCGCGCGTCAAGGGGTTATTCAGGCGTAA
PROTEIN sequence
Length: 293
MDSIKVRALLETISAGRLAKAAEALGYTPSGMSRMIAALEKELGLTLLLRDRSGVAPTATCRDLLPAFRGLLAADDAAEEAVRQVQGLSAGRLTVGAAYSRFYPLLSKAIADFSRQHPGVNVEFIEGTSSDLAHAVADHQADFCIISKRLGDFDWQLLLDDELIALVPKNHPLAAKPYMLAEDFLSEPFITIYPSQETDNSRFFAKHGIKPPEGYGTADVLAAVHMVEAGLGLTLVNGILVAQIQDVQVEKKPLLPAASVPIGVAVTKEATRSPAAEAFCRAFFARQGVIQA*