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NECEvent2014_6_6_Clostridiales_50_23_scaffold_169_15

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 10764..11306

Top 3 Functional Annotations

Value Algorithm Source
Microcompartments protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUS4_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 199.0
  • Bit_score: 138
  • Evalue 5.40e-30
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EXG83863.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 196.0
  • Bit_score: 139
  • Evalue 5.80e-30
microcompartments protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 199.0
  • Bit_score: 138
  • Evalue 1.50e-30

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Taxonomy

Clostridium sp. ASBs410 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAAGAAGCCATTGGTATGATTGAAACACGCGGAGTTCTAGCTACAGTGGAAGCCCTTGATGTCATGCTTAAAACAGCAAATGTGTCTACTGTTGAAAAAATTCGTGTTGGTGGCGGATTGACGTGTATCATCATACGTGGTGAGGTGGCTGCCGTCAGCACATCTGTTGAGGCGGCGGAAGCTGCAGTGAAACGACTGGGCGATTCGCTGGTTGGGCGGCATGTGATTCCGCGTCCGGATGATCAGCTGGAGATCCTCTTTGATGATTTGCCGGATCCGCCCTCAACAGAGACGGCCGATAAGATGCCTGAGAAAACACCGGAAATATCAGATACAGATTTAGAAAAGGATATTTCTGATACGTCTATAGAGCCTCAAAACACCACAAAGGGCATAGATATCAAACAGTTGAATCAAATGCGTGTGATTGACTTACGCAATTTAGCACGGCAGTATGAAGACTTCCCGATACAGGGTAGAGATATTTCCAATGCCAACAAAAAAACATTGTTAGCTTATTTTAAAGAATACTTTCAGTAA
PROTEIN sequence
Length: 181
MKEAIGMIETRGVLATVEALDVMLKTANVSTVEKIRVGGGLTCIIIRGEVAAVSTSVEAAEAAVKRLGDSLVGRHVIPRPDDQLEILFDDLPDPPSTETADKMPEKTPEISDTDLEKDISDTSIEPQNTTKGIDIKQLNQMRVIDLRNLARQYEDFPIQGRDISNANKKTLLAYFKEYFQ*