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NECEvent2014_6_6_Clostridiales_50_23_scaffold_187_4

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1417..2034

Top 3 Functional Annotations

Value Algorithm Source
Late embryogenesis abundant protein, group 3 n=1 Tax=Triticum aestivum RepID=LEA3_WHEAT similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 123.0
  • Bit_score: 67
  • Evalue 2.30e-08
Putative uncharacterized protein Sb01g046000 {ECO:0000313|EMBL:EER92798.1}; TaxID=4558 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliops similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 112.0
  • Bit_score: 67
  • Evalue 3.20e-08
putative alkaline shock protein similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 92.0
  • Bit_score: 60
  • Evalue 6.00e-07

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Taxonomy

Sorghum bicolor → Sorghum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 618
ATGGCAGATAAAAAACAGAAAAAATCCATGGAAAAAATGGACGAATTGCGTGCGCATACGGACTTAAAGAGTGGCTGCAATGGCGATGGCCAAGGCAACAACCCCTTGATCCCCCCCGGCGGTTCTTGTGAAATTAACGACCCGGTAGACCCGAAACTGGCACCGGCCGCCCAAGGCACCCCCATCACCAACCAAAAAGGCGGTAATCCGGACCATCAGAGCCGGAAGGACAAGGCTTCCGATAAGGCGGAAGCAGCCGGCGAAAAAGCCAAAGAAAGCGCTGAAGCCGCTAAGGAAAAGGCCGGAGAAGCGGCTGACACCGTTAAAGAAAAAGCCGGCGACGCAGCAGAAAGCGTGAAAGAAAAAGCTGCCCAGGGCAAGGCCTTCATCGGCGAAAAAATCGATGAAGCCACCGCAGATGTGGACGAACGCCCCCATGAAGACAGCTTTGTCTTTGCTGAAAATGTGGTCGAAAAAATCGCCGGCATTGCCGCCCGTGAAATCAAAGGCATCTTGGCCTTAAAGAGCAACATCATCAGTGGCTTGGCCGGGAACATCATGGGCGATGAAAACAACAGCGCCGACCCCAAACAGGGCGTTGATGTGGAAATCGGCGGT
PROTEIN sequence
Length: 206
MADKKQKKSMEKMDELRAHTDLKSGCNGDGQGNNPLIPPGGSCEINDPVDPKLAPAAQGTPITNQKGGNPDHQSRKDKASDKAEAAGEKAKESAEAAKEKAGEAADTVKEKAGDAAESVKEKAAQGKAFIGEKIDEATADVDERPHEDSFVFAENVVEKIAGIAAREIKGILALKSNIISGLAGNIMGDENNSADPKQGVDVEIGG