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NECEvent2014_6_6_Clostridiales_50_23_scaffold_213_1

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2..568

Top 3 Functional Annotations

Value Algorithm Source
rsmB; putative ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 187.0
  • Bit_score: 190
  • Evalue 6.00e-46
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 187.0
  • Bit_score: 190
  • Evalue 3.00e-45
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GRT3_SELRL similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 187.0
  • Bit_score: 190
  • Evalue 2.10e-45

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Taxonomy

Selenomonas ruminantium → Selenomonas → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
CTGTGTGCGGCACCGGGCGGGAAGACAACCCATATTGCGGCATTGATGCAAGATAAGGGCCGTGTGGATGCCTTTGATTTGCACGCTCACCGGGTTCAATTGATTCAGGAAAACGCTCGACGCCTCGGCATTACCTGCATTGAGGCCTCTGTACAGGATGGCACTCAATTTTCAGCTGATGTGCCGTATGACCGTGTGCTTGTGGACGCCCCTTGCTCCGGGTTGGGGGTTCTGAACCGGCGGCCGGATGCACGCTGGCACCGCAGGCGTCAACAGATTCCAGACTTAGTAGCCTTGCAAGGCCAATTGCTGGATCGGGCAGCAGAGGCTGTGAAGCCGGGTGGTATCTTGCTGTACAGCACCTGCACAACGCTCCGCGCCGAAAATGAAGACCAGACTAAGGCGTTTTTAGCGCGCCACCCTGAATTCGTCCCTGAGCCGCTTCCGGAGCTTCTGAGCCCCTTCCTGTCCGAGGACGGAGCAAGCGATTGTCGAATTATTCCGCAACGTGATCAGATGGATGGTTTTTACCTGGCGAAATTTAGAAAGGGTAATGCTCATGGCTGA
PROTEIN sequence
Length: 189
LCAAPGGKTTHIAALMQDKGRVDAFDLHAHRVQLIQENARRLGITCIEASVQDGTQFSADVPYDRVLVDAPCSGLGVLNRRPDARWHRRRQQIPDLVALQGQLLDRAAEAVKPGGILLYSTCTTLRAENEDQTKAFLARHPEFVPEPLPELLSPFLSEDGASDCRIIPQRDQMDGFYLAKFRKGNAHG*