ggKbase home page

NECEvent2014_6_6_Clostridiales_50_23_scaffold_252_3

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2928..3572

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasB n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LV77_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 210.0
  • Bit_score: 183
  • Evalue 1.70e-43
CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFD93804.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaer similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 210.0
  • Bit_score: 183
  • Evalue 2.40e-43
CRISPR-associated protein CasB similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 214.0
  • Bit_score: 155
  • Evalue 1.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Megasphaera genomosp. type_1 → Megasphaera → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 645
ATGAGCGAAGACAAGAAAGACAGGCCCACTGTTTCAACCGTAACGGCAGCTGTCTTGCATCAGCTTGTGCCGCTTTTAGAAATATCGGCGGGGCGCGCTGTCTTGGCCAGTTTGAGGCAGTCGGTTGGCAGCTCGGCAAGTGCTGCTGTTGGCATTTTGCCCTTTGTTTACGCGCAAATGCCGGAGGATTTTATCGGCAGAAGGGCTGACTTGAGCCATGAAGAAAAGGCCATTATTCATACCCTACAGTTGTTTGCCCTGCATCAGCAAGGGTCAAGCACTTGCGTTTGGTCCGGGGCCGATGAGGAGACGTCTGACGTAAGGCCGGCTGAGGCGTCGCCTGCAAAAAGAAGGCCGGTCACCAATATGGGGGACGCCTTAAAAGCTCTGCGGAAAGGTGACGATAGGGTGGCAGTCGACCGACGCTTTAATGCGCTGATTACGGCCACTACTTATGATGAATTGCTCCATCATTTGCGTCAGATGATTCGGTTGCTGCGGGCCAAAACCAATGTAACCGTGGATTATCCGCAATTGGCCAATGACTTGTATTGGTTCAGCAGGGGCTATGAAGAATCTCTTAGACTCAACTGGGCACGGCACTATTATCGCTTTGACAAGAAAGGACAGGACCAAGATGCCTAA
PROTEIN sequence
Length: 215
MSEDKKDRPTVSTVTAAVLHQLVPLLEISAGRAVLASLRQSVGSSASAAVGILPFVYAQMPEDFIGRRADLSHEEKAIIHTLQLFALHQQGSSTCVWSGADEETSDVRPAEASPAKRRPVTNMGDALKALRKGDDRVAVDRRFNALITATTYDELLHHLRQMIRLLRAKTNVTVDYPQLANDLYWFSRGYEESLRLNWARHYYRFDKKGQDQDA*