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NECEvent2014_6_6_Clostridiales_50_23_scaffold_266_1

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3..410)

Top 3 Functional Annotations

Value Algorithm Source
rluA; ribosomal small subunit pseudouridine synthase A (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 130.0
  • Bit_score: 136
  • Evalue 5.70e-30
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=570924 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 130.0
  • Bit_score: 136
  • Evalue 2.80e-29
Pseudouridine synthase n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPQ5_THESS similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 130.0
  • Bit_score: 136
  • Evalue 2.00e-29

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Taxonomy

Thermus sp. NMX2.A1 → Thermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 408
ATGCGTCTGGATAAATTTTTGCACGATGCCGGGCTGGGGTCCCGAAAGGATGTTGGCCGCATGATTCGCAGTGGCCGCATCATGGTAAACGGAATACCGGTGTGGGACAGGGCCCATCAAGTGACGGCAGACGGGCAGGTTCTTCTTGATAATTCGCCCATCCTTTTTCAGCGGCATCGCCATATTCTCTTACATAAGCCTGCCGGCTTGGTTACCGCCATGCGCGATCGGCGGCATGAAACGGTGATGACCCTTTTAGAGGATGTGCCGGCAGACCTGCGGCCGGTCGGTCGCCTGGATAAGGACACCACCGGGGTCTTGCTGTTCACCACAGATGGCCAATTGGCACACCGGCTGGCATCGCCGAAGCACCAGGTTGAAAAGACCTATCGTTTTAGATACGCTGGG
PROTEIN sequence
Length: 136
MRLDKFLHDAGLGSRKDVGRMIRSGRIMVNGIPVWDRAHQVTADGQVLLDNSPILFQRHRHILLHKPAGLVTAMRDRRHETVMTLLEDVPADLRPVGRLDKDTTGVLLFTTDGQLAHRLASPKHQVEKTYRFRYAG