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NECEvent2014_6_6_Clostridiales_50_23_scaffold_273_7

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 5804..6469

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK02_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 220.0
  • Bit_score: 264
  • Evalue 1.40e-67
Response regulator {ECO:0000313|EMBL:KJF27774.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 221.0
  • Bit_score: 269
  • Evalue 5.90e-69
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 220.0
  • Bit_score: 264
  • Evalue 3.80e-68

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
ATGGCACGAATCACGGTTGTTGAAGATGAAACAGCCATTCGGGAGCTGATACGGTTAAATTTAGAGTTGGCCGGCTATGAGGTACAAGAGGCCAAAGACGGCCTGGAGGGCCTAAACCTTATTCGCAACGGCTCAACAGACTTAGTGCTGCTGGACATTATGATGCCAAAGATGGACGGGTATACGCTTTTAGAAGAGTTAAAGAAAAACAATATCGCCGTGATTTGCCTGACGGCCAAGGATTCGGTCCGCGATAAGGTCAAAGGCCTTGAACTCGGCGCAGACGATTATATGACCAAGCCCTTCGACAGCATGGAGCTTTTGGCGCGGGTCAAGGCGGTTTTGCGACGCACCGGCGTGGACAAGGCGAGTGACGTGGCCAAAGCGGTCAGTTATCGGGATATTGTTTTAGAACCGGACCAGCACCGGGTCAGTAAAAACGGCCAAGAGGTGCCCTTGACCTTAAAAGAGTTTGAACTTTTGGCCTATTTAATTGACCACAAGGGCAATGTTCTCACCCGCGAACAATTGCTCAGCCAGATTTGGGGCTATGATTATGAAGGCAATACGCGGACCGTTGATATGCACGTGCAGCGGTTGCGGACCAAACTGGCCCTGGATACCATCAAAACGGTGTATAAAGTGGGCTACAGACTGGAGGAATAA
PROTEIN sequence
Length: 222
MARITVVEDETAIRELIRLNLELAGYEVQEAKDGLEGLNLIRNGSTDLVLLDIMMPKMDGYTLLEELKKNNIAVICLTAKDSVRDKVKGLELGADDYMTKPFDSMELLARVKAVLRRTGVDKASDVAKAVSYRDIVLEPDQHRVSKNGQEVPLTLKEFELLAYLIDHKGNVLTREQLLSQIWGYDYEGNTRTVDMHVQRLRTKLALDTIKTVYKVGYRLEE*