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NECEvent2014_6_6_Clostridiales_50_23_scaffold_279_3

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(812..1357)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BIG3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 181.0
  • Bit_score: 227
  • Evalue 8.90e-57
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 181.0
  • Bit_score: 227
  • Evalue 1.20e-56
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 181.0
  • Bit_score: 224
  • Evalue 2.80e-56

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Taxonomy

Veillonella ratti → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 546
ATGAGTCGAATTGGTAAACAACCGGTCGTAATCCCGGAAGGGGTTACTGTTGATATCGCTGAGGGCAATGTGGTTCACGCCAAAGGCCCGAAAGGCGAACTGACAAAGACCATGCATCCGGATATGATTCTGAGCATGGAAAACGGTGAAATCACCGTTGCTACACCTGAAAATCAGGAAAAAGCTTATGGACCGCTCTGGGGCCTCACCCGCAGCTTGGTGAACAATATGGTTCAAGGCGTCCATGACGGATACTCTAAGACCTTAATCTTAAAAGGGGTTGGGTATCGCGCCCTGGTCAACGGTAATAAATTAACCTTGAATGTGGGCTACAGCCATCCGGTTGAAATGGAAGCTCCGCAAGGGATCACCATTGAAGCTCCGGAAGCAACAAAAGTTGTCGTCTCCGGCGCAGATAAAGAACTCGTCGGCGATGTGGCCGCTGATATTCGTGCCGTGCGCTTGCCTGAACCTTACAAGGGCAAAGGGATTCGTTACGAAAATGAACATATCAAGCTTAAAGCCGGTAAGACGGGCACCAAGTAA
PROTEIN sequence
Length: 182
MSRIGKQPVVIPEGVTVDIAEGNVVHAKGPKGELTKTMHPDMILSMENGEITVATPENQEKAYGPLWGLTRSLVNNMVQGVHDGYSKTLILKGVGYRALVNGNKLTLNVGYSHPVEMEAPQGITIEAPEATKVVVSGADKELVGDVAADIRAVRLPEPYKGKGIRYENEHIKLKAGKTGTK*