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NECEvent2014_6_6_Clostridiales_50_23_scaffold_351_6

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2855..3766

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=908339 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacil similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 285.0
  • Bit_score: 218
  • Evalue 1.70e-53
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 302.0
  • Bit_score: 217
  • Evalue 5.70e-54
RNA pseudouridine synthase n=1 Tax=Caldibacillus debilis RepID=UPI000364E96E similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 287.0
  • Bit_score: 222
  • Evalue 6.20e-55

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Taxonomy

Lactobacillus oris → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAAACAAGTCCACAAACAAGTAAATTTCAATATGGGGCGCAAGATCGGCAACGCTTGGATGAATGGCTCGCCGGACAAATGGGTGAAAGCAGGTCGGCCATTCGAAAGGCTGTGAAAGAAGGACGGGTACGCCTTAATGGAGTAGTCGTTCGCAAACCCGGCCAGCAATTGACATGTGGCGATGGTATTGAATGGTCTGCACCGCAACCAATTGACTTGACGCCGGTTGATATGCCGCTGGATATTCTTTATGAGGATAAGTGGCTTCTAGTTGTCAATAAGCCGGCAGGCCTTTTGGTGCATGCAGCGACCCCTTGCGATGATGCGACCCTGGTGAATGGATTGCTTGCCCATACGACGCTATCGCCGGGGACCGATTATTTCCGACCGGGTATCGTCCACCGGTTAGATAAAGACACCTCCGGCGCCTTGCTGGTTGCAAAAGATATGGAAACGCACGCCCAGCTGGCTGAAGACTTTGGCAAACATAAGGTGTTGCGCCGCTATTTAACCTTGGTGCATGGCTGCCTGCCTTTTGCATTTAAACGGGTTGATGCGCCAATTGCACGGATTACCGGCCACCCATACAAACAAGAAATTAATCCTGCCGGCCGGCCCGCTGTCAGTGATATCGATGCATTGGTTTGCACTGATGAGGCTTCTTTAGCAGCGGTTCGTTTATGGACGGGAAGAACCCATCAGGTTCGGGTACACATGGCTTCCCTGGGCCACCCTTGCATAGGGGATTGGGCATATGCTCCAGGACAGAAGGCATACGGCTTCAAGGGGCAGGCTTTACATAGTTGGCAATTGCAATTTTTCCATCCACAGCTCAATCAATGGATTTCTATTTTTGCACCGCCACCCCCTCATTTTTGCCAAATCATTGATAACTTGCTGGATAGATAA
PROTEIN sequence
Length: 304
MKTSPQTSKFQYGAQDRQRLDEWLAGQMGESRSAIRKAVKEGRVRLNGVVVRKPGQQLTCGDGIEWSAPQPIDLTPVDMPLDILYEDKWLLVVNKPAGLLVHAATPCDDATLVNGLLAHTTLSPGTDYFRPGIVHRLDKDTSGALLVAKDMETHAQLAEDFGKHKVLRRYLTLVHGCLPFAFKRVDAPIARITGHPYKQEINPAGRPAVSDIDALVCTDEASLAAVRLWTGRTHQVRVHMASLGHPCIGDWAYAPGQKAYGFKGQALHSWQLQFFHPQLNQWISIFAPPPPHFCQIIDNLLDR*