ggKbase home page

NECEvent2014_6_6_Clostridiales_50_23_scaffold_388_1

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3..497

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 146.0
  • Bit_score: 84
  • Evalue 1.20e-13
Ribonuclease M5 n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7M309_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 146.0
  • Bit_score: 84
  • Evalue 8.40e-14
primase-like protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 165.0
  • Bit_score: 81
  • Evalue 3.40e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidaminococcus sp. CAG:542 → Acidaminococcus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
GCTGTACGGCGCGCCGTATCGGCACTGATCTTGCAGACGCGCGGTTTAGCCGCCATCCATCAAGACCTGGATCTCTGGGCGCCCTTTGCTGCCCACGGCGGGCTGGTCATTTTAACAGACCCGGACGGGCCGGGCCGCCGCTTGCGCGACCACGTCACCGCCCGGTTTCCCCGGGCCCTGCAGGCCCAGCTGCCGGCCGCTGACTGCCGCGGCCCCCATGGCCGGTTAGGCGTCCAATTCGCCCCACCGGAAGCCATTCGGGCCGCCTTGACGGATGCCGGCTGCCACCAACGCCAGGCCCCACCGACGGATACCCTGGCCGCCCTAATCGCCTCCGGCTTAGGCGGCGGACCCGCCGGCAAGCAAGGCCGCCGGCGCCTCTGTACCGCTTTGGGCATTCCCATGGCCTCGGCCCCACACCTGGCGGCCTATTTGAACGCCTTGGACCTTCCGGTCCGGCAAGCCCTAAAGCTGCTAGACGCTACACCGCTCTAA
PROTEIN sequence
Length: 165
AVRRAVSALILQTRGLAAIHQDLDLWAPFAAHGGLVILTDPDGPGRRLRDHVTARFPRALQAQLPAADCRGPHGRLGVQFAPPEAIRAALTDAGCHQRQAPPTDTLAALIASGLGGGPAGKQGRRRLCTALGIPMASAPHLAAYLNALDLPVRQALKLLDATPL*