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NECEvent2014_6_6_Clostridiales_50_23_scaffold_427_2

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(157..963)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=18 Tax=Listeria monocytogenes RepID=S5KIM7_LISMN similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 260.0
  • Bit_score: 299
  • Evalue 3.60e-78
membrane protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 260.0
  • Bit_score: 299
  • Evalue 1.00e-78
Membrane protein {ECO:0000313|EMBL:AIS59414.1}; TaxID=202752 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria ivanovii subsp. londoniensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 260.0
  • Bit_score: 299
  • Evalue 5.00e-78

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Taxonomy

Listeria ivanovii → Listeria → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 807
ATGATCATTGATTTTTTATCGTATTTTGATGCGGCCTTATTGATGCGGTATCTTGCTGTTTTCTTTATTTTGGTTTTTATGGAAGGCCTTTTATCGGCAGACAACGCCTTGGTATTGGCGGTGATGGTGCGGCCCCTGCCGGAAAATCACCGCAATGAGGCCCTGTTTTACGGGCTGATTGGTGCCTTTGTTATGCGCTTCGGCGCCCTGTTTATTATTTCTTATCTGGCCAATATTTGGCAGGCACAAGCGGTGGGCGCCGCCTACCTGCTTTATGTGGCGGCTAAAAACCTACACGCCTACGCTAAAAAAGAAGAAGCGCTTACGCCGGAAACGGTGTTGAAAGAGCCGGTAAAAAAGGAATATTCACGAAAAGTTTTTTGGCTGACTGTTGCTAAGGTTGAATTGGCGGACATTGCTTTTGCAGTGGATTCTATTTTGGCGGCTGTGGCGATTGCCATGAGCTTGCCGCCCTTAGGGCATTCCCACATCGGGGGATTTGACACAGGGCGCTTTTTGGTGGTCTTCTTAGGCGGTTTGGCCGGCTTGATTTTAATGCGGTTTGCGGCCACCGTTTTTGTCAAATTGCTGGACCGCCGTCCAAAATTGGAAAAGGCAGCCTTTATCCTGGTCGGCTGGGTGGGGATCAAATTGATTGTCGTCACCTTGGCCCATCCGGCGGTAGGCATCATTGCTGAAGATTTCCCGCATTCCATTCCCTGGCAGATTATCTTCTTTGGCACTATGGCAGCCATTGCGGTTTGGGGTTGGGTATCTTCCGCACCGGAGGAAAATCATGCTGAATAA
PROTEIN sequence
Length: 269
MIIDFLSYFDAALLMRYLAVFFILVFMEGLLSADNALVLAVMVRPLPENHRNEALFYGLIGAFVMRFGALFIISYLANIWQAQAVGAAYLLYVAAKNLHAYAKKEEALTPETVLKEPVKKEYSRKVFWLTVAKVELADIAFAVDSILAAVAIAMSLPPLGHSHIGGFDTGRFLVVFLGGLAGLILMRFAATVFVKLLDRRPKLEKAAFILVGWVGIKLIVVTLAHPAVGIIAEDFPHSIPWQIIFFGTMAAIAVWGWVSSAPEENHAE*