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NECEvent2014_6_6_Clostridiales_50_23_plum

NECEvent2014_6_6_Clostridiales_50_1

In projects: NECEvent2014_6_6

Consensus taxonomy: Clostridiales → Clostridia → Firmicutes → Bacteria

Metagenomic Context

Parent: NECEvent2014_6_6_UNK Manually curated genome
Original version: NECEvent2014_6_6_Clostridiales_50_23

Properties

Avg. coverage: 1.00 Longest contig: 21.35 Kbp Bin length: 1.61 Mbp GC content: 50.38 %

Contigs count: 430 Features count: 1899 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2

Displaying items 351-400 of 430 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
NECEvent2014_6_6_Clostridiales_50_23_scaffold_82 Species: Desulfotomaculum kuznetsovii (50%)	2	1222 bp	45.09	1.00	95.25
NECEvent2014_6_6_Clostridiales_50_23_scaffold_83 Species: [Clostridium] saccharolyticum (50%)	2	1291 bp	51.74	1.00	50.19
NECEvent2014_6_6_Clostridiales_50_23_scaffold_84 Species: Emiliania huxleyi (50%)	2	1289 bp	52.75	1.00	83.79
NECEvent2014_6_6_Clostridiales_50_23_scaffold_343 Species: Helcococcus kunzii (50%)	2	2710 bp	51.59	1.00	91.77
NECEvent2014_6_6_Clostridiales_50_23_scaffold_344 Species: Anaerotruncus colihominis (50%)	2	1239 bp	51.98	1.00	100.00
NECEvent2014_6_6_Clostridiales_50_23_scaffold_93 Species: Ammonifex degensii (50%)	2	2804 bp	54.60	1.00	73.72
NECEvent2014_6_6_Clostridiales_50_23_scaffold_354 Species: Clostridiaceae bacterium BRH_c20a (50%)	2	2372 bp	49.62	1.00	89.04
NECEvent2014_6_6_Clostridiales_50_23_scaffold_101 Species: Clostridium sartagoforme (50%)	2	1521 bp	51.55	1.00	82.25
NECEvent2014_6_6_Clostridiales_50_23_scaffold_362 Species: Eubacterium sp. CAG:274 (50%)	2	1861 bp	47.50	1.00	102.04
NECEvent2014_6_6_Clostridiales_50_23_scaffold_108 Species: Moorella glycerini (50%)	2	3637 bp	47.15	1.00	98.49
NECEvent2014_6_6_Clostridiales_50_23_scaffold_364 Species: Firmicutes bacterium CAG:466 (50%)	2	1130 bp	49.20	1.00	78.05
NECEvent2014_6_6_Clostridiales_50_23_scaffold_365 Species: Enterococcus cecorum (50%)	2	1482 bp	48.38	1.00	70.65
NECEvent2014_6_6_Clostridiales_50_23_scaffold_368 Species: Clostridiaceae bacterium BRH_c20a (100%)	2	2258 bp	51.51	1.00	93.93
NECEvent2014_6_6_Clostridiales_50_23_scaffold_114 Species: Eremococcus coleocola (50%)	2	1164 bp	61.68	1.00	91.24
NECEvent2014_6_6_Clostridiales_50_23_scaffold_370 Species: Desulfotomaculum ruminis (50%)	2	1560 bp	41.22	1.00	53.08
NECEvent2014_6_6_Clostridiales_50_23_scaffold_115 Species: Aerococcus viridans (50%)	2	1028 bp	56.61	1.00	89.30
NECEvent2014_6_6_Clostridiales_50_23_scaffold_116 Species: [Clostridium] methylpentosum (50%)	2	1412 bp	61.90	1.00	95.40
NECEvent2014_6_6_Clostridiales_50_23_scaffold_373 Species: Syntrophomonas wolfei (50%)	2	2251 bp	48.02	1.00	99.42
NECEvent2014_6_6_Clostridiales_50_23_scaffold_121 Species: Mogibacterium sp. CM50 (50%)	2	1720 bp	47.03	1.00	83.02
NECEvent2014_6_6_Clostridiales_50_23_scaffold_122 Species: Peptoniphilus lacrimalis (100%)	2	1103 bp	40.44	1.00	63.64
NECEvent2014_6_6_Clostridiales_50_23_scaffold_123 Species: Clostridiaceae bacterium BRH_c20a (50%)	2	2738 bp	47.55	1.00	100.04
NECEvent2014_6_6_Clostridiales_50_23_scaffold_126 Species: Bacillus thermoamylovorans (50%)	2	1160 bp	52.84	1.00	95.43
NECEvent2014_6_6_Clostridiales_50_23_scaffold_127 Species: Anaerococcus prevotii (50%)	2	2389 bp	53.08	1.00	72.71
NECEvent2014_6_6_Clostridiales_50_23_scaffold_128 Species: Eubacterium saphenum (50%)	2	1157 bp	52.72	1.00	98.53
NECEvent2014_6_6_Clostridiales_50_23_scaffold_130 Species: Ruminiclostridium thermocellum (50%)	2	1094 bp	46.25	1.00	98.45
NECEvent2014_6_6_Clostridiales_50_23_scaffold_391 Species: Bifidobacterium stellenboschense (50%)	2	1243 bp	51.17	1.00	78.20
NECEvent2014_6_6_Clostridiales_50_23_scaffold_138 Species: Oscillibacter sp. KLE 1745 (50%)	2	1151 bp	51.35	1.00	72.20
NECEvent2014_6_6_Clostridiales_50_23_scaffold_394 Species: Thermacetogenium phaeum (50%)	2	1350 bp	50.81	1.00	88.67
NECEvent2014_6_6_Clostridiales_50_23_scaffold_398 Species: Peptoniphilus indolicus (50%)	2	2316 bp	54.79	1.00	100.13
NECEvent2014_6_6_Clostridiales_50_23_scaffold_144 Species: Clostridiales bacterium S5-A11 (50%)	2	2672 bp	51.83	1.00	77.25
NECEvent2014_6_6_Clostridiales_50_23_scaffold_400 Species: Youngiibacter fragilis (50%)	2	1249 bp	44.84	1.00	41.07
NECEvent2014_6_6_Clostridiales_50_23_scaffold_146 Species: Carboxydothermus hydrogenoformans (50%)	2	3728 bp	46.43	1.00	95.60
NECEvent2014_6_6_Clostridiales_50_23_scaffold_402 Species: GWD2_Clostridiales_32_59_curated (50%)	2	3146 bp	49.87	1.00	90.97
NECEvent2014_6_6_Clostridiales_50_23_scaffold_406 Species: Dehalobacter restrictus (50%)	2	2858 bp	54.69	1.00	99.93
NECEvent2014_6_6_Clostridiales_50_23_scaffold_151 Species: Geobacillus stearothermophilus (50%)	2	2347 bp	50.40	1.00	78.48
NECEvent2014_6_6_Clostridiales_50_23_scaffold_155 Species: Desulfotomaculum kuznetsovii (100%)	2	1466 bp	52.05	1.00	93.32
NECEvent2014_6_6_Clostridiales_50_23_scaffold_413 Species: Clostridium botulinum (50%)	2	3729 bp	50.52	1.00	90.75
NECEvent2014_6_6_Clostridiales_50_23_scaffold_159 Species: Clostridium sp. CAG:505 (50%)	2	1466 bp	55.18	1.00	88.81
NECEvent2014_6_6_Clostridiales_50_23_scaffold_160 Species: Ruminococcaceae bacterium 585-1 (50%)	2	1033 bp	58.95	1.00	99.03
NECEvent2014_6_6_Clostridiales_50_23_scaffold_416 Species: Clostridiaceae bacterium BRH_c20a (50%)	2	1719 bp	55.96	1.00	99.13
NECEvent2014_6_6_Clostridiales_50_23_scaffold_417 Species: Butyricicoccus pullicaecorum (50%)	2	1818 bp	55.39	1.00	95.05
NECEvent2014_6_6_Clostridiales_50_23_scaffold_167 Species: [Clostridium] stercorarium (50%)	2	1085 bp	53.00	1.00	100.09
NECEvent2014_6_6_Clostridiales_50_23_scaffold_425 Species: Tumebacillus flagellatus (50%)	2	1346 bp	51.49	1.00	96.06
NECEvent2014_6_6_Clostridiales_50_23_scaffold_174 Species: Mitsuokella multacida (50%)	2	1488 bp	49.46	1.00	86.69
NECEvent2014_6_6_Clostridiales_50_23_scaffold_176 Species: Veillonella sp. oral taxon 780 (50%)	2	2436 bp	57.88	1.00	95.69
NECEvent2014_6_6_Clostridiales_50_23_scaffold_185 Species: Enterococcus faecalis (100%)	1	2775 bp	48.97	1.00	99.89
NECEvent2014_6_6_Clostridiales_50_23_scaffold_186 Species: Clostridiaceae bacterium BRH_c20a (100%)	1	1040 bp	50.19	1.00	99.81
NECEvent2014_6_6_Clostridiales_50_23_scaffold_188 Species: Peptoniphilus sp. 1-1 (100%)	1	978 bp	44.99	1.00	67.18
NECEvent2014_6_6_Clostridiales_50_23_scaffold_198 Species: Paenibacillus alvei (100%)	1	1069 bp	57.25	1.00	99.63
NECEvent2014_6_6_Clostridiales_50_23_scaffold_208 Species: Macrococcus caseolyticus (100%)	1	1749 bp	49.97	1.00	79.07

Displaying items 351-400 of 430 in total

NECEvent2014_6_6_Clostridiales_50_23_plum

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

NECEvent2014_6_6_Clostridiales_50_23_plum

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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