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NECEvent2014_6_6_Clostridiales_50_23_plum

NECEvent2014_6_6_Clostridiales_50_1
In projects: NECEvent2014_6_6

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 430 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_1
Species: Clostridiaceae bacterium BRH_c20a (66.67%)
3 3848 bp 55.85 1.00 97.53
NECEvent2014_6_6_Clostridiales_50_23_scaffold_2
Phylum: Firmicutes (100%)
3 1647 bp 51.49 1.00 99.45
NECEvent2014_6_6_Clostridiales_50_23_scaffold_3
Genus: Clostridium (66.67%)
3 2584 bp 43.19 1.00 76.04
NECEvent2014_6_6_Clostridiales_50_23_scaffold_4
Species: Peptoniphilus sp. oral taxon 386 (100%)
2 1789 bp 54.39 1.00 72.61
NECEvent2014_6_6_Clostridiales_50_23_scaffold_5 3 1188 bp 48.40 1.00 86.36
NECEvent2014_6_6_Clostridiales_50_23_scaffold_6
Order: Clostridiales (66.67%)
6 7575 bp 54.30 1.00 95.72
NECEvent2014_6_6_Clostridiales_50_23_scaffold_7
Phylum: Firmicutes (83.33%)
6 3976 bp 58.30 1.00 98.99
NECEvent2014_6_6_Clostridiales_50_23_scaffold_8
Species: Flavonifractor plautii (100%)
1 1628 bp 51.54 1.00 86.79
NECEvent2014_6_6_Clostridiales_50_23_scaffold_9
Order: Clostridiales (66.67%)
3 2112 bp 51.42 1.00 88.78
NECEvent2014_6_6_Clostridiales_50_23_scaffold_10
Species: Clostridiaceae bacterium BRH_c20a (66.67%)
3 1963 bp 50.43 1.00 95.82
NECEvent2014_6_6_Clostridiales_50_23_scaffold_11
Order: Clostridiales (66.67%)
6 3989 bp 49.34 1.00 78.59
NECEvent2014_6_6_Clostridiales_50_23_scaffold_12
Order: Clostridiales (50%)
4 1939 bp 45.75 1.00 79.68
NECEvent2014_6_6_Clostridiales_50_23_scaffold_13
Order: Clostridiales (66.67%)
3 2293 bp 54.51 1.00 88.70
NECEvent2014_6_6_Clostridiales_50_23_scaffold_14
Species: Faecalibacterium prausnitzii (50%)
2 1114 bp 45.78 1.00 106.64
NECEvent2014_6_6_Clostridiales_50_23_scaffold_15
Order: Clostridiales (57.14%)
7 4328 bp 56.63 1.00 85.12
NECEvent2014_6_6_Clostridiales_50_23_scaffold_16
Species: Gottschalkia acidurici (50%)
2 5714 bp 41.51 1.00 68.10
NECEvent2014_6_6_Clostridiales_50_23_scaffold_17
Order: Clostridiales (50%)
8 5725 bp 46.41 1.00 77.55
NECEvent2014_6_6_Clostridiales_50_23_scaffold_18
Phylum: Firmicutes (66.67%)
3 2649 bp 45.60 1.00 92.30
NECEvent2014_6_6_Clostridiales_50_23_scaffold_19
Species: Oscillibacter sp. KLE 1745 (50%)
2 1626 bp 49.51 1.00 100.18
NECEvent2014_6_6_Clostridiales_50_23_scaffold_20
Order: Clostridiales (60%)
5 3725 bp 50.01 1.00 93.26
NECEvent2014_6_6_Clostridiales_50_23_scaffold_21
Order: Clostridiales (66.67%)
3 1350 bp 50.81 1.00 100.00
NECEvent2014_6_6_Clostridiales_50_23_scaffold_22
Species: [Clostridium] methylpentosum (50%)
2 1615 bp 44.15 1.00 93.99
NECEvent2014_6_6_Clostridiales_50_23_scaffold_23
Species: Coprobacillus sp. 29_1 (50%)
2 1367 bp 53.69 1.00 90.20
NECEvent2014_6_6_Clostridiales_50_23_scaffold_24
Genus: Clostridium (50%)
4 2074 bp 56.65 1.00 94.02
NECEvent2014_6_6_Clostridiales_50_23_scaffold_25
Order: Clostridiales (66.67%)
3 1960 bp 47.40 1.00 99.49
NECEvent2014_6_6_Clostridiales_50_23_scaffold_26
Order: Clostridiales (50%)
8 4912 bp 52.42 1.00 90.27
NECEvent2014_6_6_Clostridiales_50_23_scaffold_27
Order: Clostridiales (60%)
5 3263 bp 59.33 1.00 95.99
NECEvent2014_6_6_Clostridiales_50_23_scaffold_28
Order: Clostridiales (100%)
3 3739 bp 55.71 1.00 98.37
NECEvent2014_6_6_Clostridiales_50_23_scaffold_29
Species: Peptoniphilus sp. oral taxon 375 (100%)
1 1332 bp 48.42 1.00 89.64
NECEvent2014_6_6_Clostridiales_50_23_scaffold_30
Class: Clostridia (50%)
4 2376 bp 45.41 1.00 96.59
NECEvent2014_6_6_Clostridiales_50_23_scaffold_31
Order: Clostridiales (55.56%)
9 7372 bp 50.71 1.00 91.36
NECEvent2014_6_6_Clostridiales_50_23_scaffold_32
Phylum: Firmicutes (50%)
4 3848 bp 53.56 1.00 88.18
NECEvent2014_6_6_Clostridiales_50_23_scaffold_33
Species: Desulfitobacterium hafniense (66.67%)
3 1679 bp 46.93 1.00 97.20
NECEvent2014_6_6_Clostridiales_50_23_scaffold_34
Species: Eubacterium ramulus (60%)
5 2149 bp 47.84 1.00 74.41
NECEvent2014_6_6_Clostridiales_50_23_scaffold_35
Order: Clostridiales (71.43%)
7 7855 bp 55.12 1.00 91.66
NECEvent2014_6_6_Clostridiales_50_23_scaffold_36
Species: Peptoclostridium difficile (50%)
2 1611 bp 52.33 1.00 100.19
NECEvent2014_6_6_Clostridiales_50_23_scaffold_37
Order: Clostridiales (100%)
3 3337 bp 47.29 1.00 88.82
NECEvent2014_6_6_Clostridiales_50_23_scaffold_38
Species: Youngiibacter fragilis (100%)
1 1607 bp 41.13 1.00 99.88
NECEvent2014_6_6_Clostridiales_50_23_scaffold_39
Domain: Bacteria (83.33%)
6 3858 bp 48.65 1.00 100.00
NECEvent2014_6_6_Clostridiales_50_23_scaffold_40
Phylum: Firmicutes (100%)
3 1457 bp 49.07 1.00 88.74
NECEvent2014_6_6_Clostridiales_50_23_scaffold_41
Phylum: Firmicutes (62.5%)
8 11710 bp 44.41 1.00 89.77
NECEvent2014_6_6_Clostridiales_50_23_scaffold_42
Species: Clostridiales bacterium S5-A11 (50%)
2 1600 bp 56.56 1.00 91.31
NECEvent2014_6_6_Clostridiales_50_23_scaffold_43
Species: Bacillus okhensis (100%)
1 1597 bp 52.22 1.00 99.75
NECEvent2014_6_6_Clostridiales_50_23_scaffold_44
Order: Clostridiales (75%)
4 2902 bp 50.55 1.00 96.97
NECEvent2014_6_6_Clostridiales_50_23_scaffold_45
Species: Peptoniphilus sp. BV3AC2 (100%)
1 1628 bp 48.53 1.00 99.88
NECEvent2014_6_6_Clostridiales_50_23_scaffold_46
Order: Clostridiales (75%)
4 2920 bp 49.45 1.00 90.62
NECEvent2014_6_6_Clostridiales_50_23_scaffold_47
Order: Clostridiales (75%)
4 2718 bp 48.71 1.00 90.07
NECEvent2014_6_6_Clostridiales_50_23_scaffold_48
Order: Clostridiales (62.5%)
8 7784 bp 49.68 1.00 90.07
NECEvent2014_6_6_Clostridiales_50_23_scaffold_49
Order: Clostridiales (100%)
3 1589 bp 47.95 1.00 91.76
NECEvent2014_6_6_Clostridiales_50_23_scaffold_50
Species: Clostridiaceae bacterium BRH_c20a (60%)
5 4649 bp 48.10 1.00 97.89
Displaying items 1-50 of 430 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.