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NECEvent2014_6_6_scaffold_4860_2

Organism: NECEvent2014_6_6_UNK

partial RP 0 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: comp(1123..1437)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Salmonella enterica subsp. enterica serovar Paratyphi A str. JX05-19 RepID=S3DZ92_SALPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.20e-50
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 3.40e-51
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.70e-50

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Taxonomy

Klebsiella pneumoniae → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CCAATCGGTGATGATGAAGATTCGCATCTGGGTGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGACTCTGCCACCACCGAGAGCCTGCGTGCTGCCACGCACGACGTGCTGGCTGGCCTGACCGCCCGTGAAGCCAAAGTGCTGCGTATGCGTTTCGGTATCGACATGAACACCGACCACACGCTGGAAGAAGTGGGTAAACAGTTTGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGTAAGCTGCGCCATCCGAGCCGCTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAA
PROTEIN sequence
Length: 105
PIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*