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NECEvent2014_6_6_scaffold_27_28

Organism: NECEvent2014_6_6_Actinomyces_europaeus-rel_56_19

near complete RP 52 / 55 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(28138..28740)

Top 3 Functional Annotations

Value Algorithm Source
TIGR02947 family RNA polymerase sigma-70 factor n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WSL5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 200.0
  • Bit_score: 386
  • Evalue 1.70e-104
  • rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KGF02680.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 395
  • Evalue 3.80e-107
rpoE; RNA polymerase sigma-70 factor, sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 198.0
  • Bit_score: 249
  • Evalue 8.90e-64

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Taxonomy

Actinomyces sp. S4-C9 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGTGATGGACAAGAAGGAACAGGTAGACGAGGCCGAGCTTCGCGCGCGGTTCGAAGAAGAGGCGCTCCCTTTGCTAGACCAGCTGTACGGGGCGGCGTTTCGTATGACCGGTAACGAGGCAGATGCTCAAGATCTGGTGCAGGACACGTATGTGCGTGCATTTAGCTCGTTCAACACATTCAAGCCGGGTACCAATTTGAAGGCGTGGATGTATCGAATCTTGAAGAACTCGTTCATTAACACCTACCGCAAGAATCAGCGGCGGCCGCAACAAACCTCCGATGAGGGAGTGCAGGACTGGCAACTAGTTGAGGCCTCCAGTCACCATCCGGTCGCCCTTGAATCCGCGGAGGCTGCGGCGCTTGACTCGCTACCAGACGACACGGTTCGTGAAGCCCTCGAGTCTCTTTCTGACACGTATCGCGAGGCGGTGCTCCTGGCCGACGTTGAAGGGTTTTCTTACAAAGAGATCGCCCAAATCATGGGTACCCCCGTTGGCACTGTGATGTCGCGAATCTATCGCGGTCGGGCGCAGCTTCGAACGGCGCTTGCAGATTATGCGAAACGAATGGGAATTGGAGTGAAGGAGGATCATGCTTAA
PROTEIN sequence
Length: 201
MVMDKKEQVDEAELRARFEEEALPLLDQLYGAAFRMTGNEADAQDLVQDTYVRAFSSFNTFKPGTNLKAWMYRILKNSFINTYRKNQRRPQQTSDEGVQDWQLVEASSHHPVALESAEAAALDSLPDDTVREALESLSDTYREAVLLADVEGFSYKEIAQIMGTPVGTVMSRIYRGRAQLRTALADYAKRMGIGVKEDHA*