ggKbase home page

NECEvent2014_6_6_scaffold_2248_1

Organism: NECEvent2014_6_6_Clostridium_paraputrificum_30_161

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(3..803)

Top 3 Functional Annotations

Value Algorithm Source
MdsC protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RET6_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 267.0
  • Bit_score: 321
  • Evalue 6.60e-85
MdsC protein {ECO:0000313|EMBL:EDT27551.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 267.0
  • Bit_score: 321
  • Evalue 9.30e-85
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 267.0
  • Bit_score: 317
  • Evalue 4.60e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 801
ATGAAGGGGACGTATAGATGTAAAGAGTTAGCTGAAAAATTTAAATTTAGCGGGGAACTTATAAACTCAGAAAGACATATATGTGGCCATATAAATGATACTCATATATTAAAATTTAAGCAATCTGATGGAACTCTAAAGAAATATATTCTTCAAAGAATTAATACAGATGTTTTTCCAGCTGTTGATGAATTAATGAATAATATAGATAGGGTTACTAAACACGTTTCTAAGAAGGTTCAAGAAGAAGGTGGAGACGTAACAAGAGAAGGGTTACGTTTAGTGCCAACAGTGGATGAAAAGTTATATTATAGAACAGAAGAAGGGGATTGTTTTAGAGGTTATCATTTTATAGATGGTGCAACAACTTATATGATGGTAGAAAATCCAATGGATTTTTATAAATGTGGAAAAGCTTTAGGAAAGTTCCAAAGGCAACTTTCAGACTTTCCAGCAGATACAGTATATGAAACCATACCAGACTTTCATAATACAAGAAAGAGATATAATGATTTTCTTGAAGCAGTAAAAAACAATCCTTGTGATAGGGTAAAAGGTGTACAAGCTGAAATTGATTTTATTATGACTAGGGAAAAAGAAACTGGAGTTTTAGTAGATTTATTAAATGAAGGTAAGCTTCCACTTAGAGTTACCCATAATGATACAAAGTTCAATAATATAATGATAGATGATAAAACAGGGGATGCAATCTGTGTTATAGATTTAGATACAGTTATGCCAGGTTTATCATTATATGATTATGGTGATTCTATACGTTCAGGAGCAACTACTGCTTTAGAA
PROTEIN sequence
Length: 267
MKGTYRCKELAEKFKFSGELINSERHICGHINDTHILKFKQSDGTLKKYILQRINTDVFPAVDELMNNIDRVTKHVSKKVQEEGGDVTREGLRLVPTVDEKLYYRTEEGDCFRGYHFIDGATTYMMVENPMDFYKCGKALGKFQRQLSDFPADTVYETIPDFHNTRKRYNDFLEAVKNNPCDRVKGVQAEIDFIMTREKETGVLVDLLNEGKLPLRVTHNDTKFNNIMIDDKTGDAICVIDLDTVMPGLSLYDYGDSIRSGATTALE