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NECEvent2014_6_6_scaffold_5096_2

Organism: NECEvent2014_6_6_Clostridium_paraputrificum_30_161

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(823..1308)

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 294
  • Evalue 1.50e-77
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01032}; Short=IPMI {ECO:00 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 294
  • Evalue 7.40e-77
3-isopropylmalate dehydratase small subunit n=2 Tax=Clostridium botulinum B RepID=LEUD_CLOBB similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 294
  • Evalue 5.30e-77

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
ATGAAAGTAACAGGAAAAGTTTTTAAGTATGGCGATAATGTAGATACAGATGTAATAATTCCAGCAAGATATTTAAATACTTCAGTGCATAAAGAACTTGCTGCACACTGTATGGAAGATATAGATAAAGAGTTTGTTAAGAATGTGGAAGATGGAGATTTTATTGTAGCAAATAAAAATTTTGGTTGTGGATCTTCACGAGAACATGCACCTATAGCTATAAAGGCAGCAGGGGTTAGCTGTGTAATAGCTTCAACTTTTGCAAGAATATTCTACAGAAATGCTATTAATATAGGATTACCTATTTTAGAATGTGATGAGGCTGTTAAGGCAATAGATAATGGAGATAAGCTAGAGGTTGACTTCTCTACAGGAGTAATTAAAAACCTAACTAAGAATGAAGAATATAAGGGAGAACCATTCCCAGAGTTTATGCAAAATATAATAGATAATGACGGATTAATTGGATATATAAGAAATAAATAA
PROTEIN sequence
Length: 162
MKVTGKVFKYGDNVDTDVIIPARYLNTSVHKELAAHCMEDIDKEFVKNVEDGDFIVANKNFGCGSSREHAPIAIKAAGVSCVIASTFARIFYRNAINIGLPILECDEAVKAIDNGDKLEVDFSTGVIKNLTKNEEYKGEPFPEFMQNIIDNDGLIGYIRNK*