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NECEvent2014_6_6_scaffold_411_28

Organism: NECEvent2014_6_6_Enterobacter_cloacae-rel_56_227_partial

partial RP 20 / 55 MC: 3 BSCG 21 / 51 ASCG 8 / 38 MC: 2
Location: comp(26065..26907)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Salmonella choleraesuis RepID=UPI00019104D2 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 304.0
  • Bit_score: 513
  • Evalue 1.30e-142
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=766142 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 298.0
  • Bit_score: 462
  • Evalue 4.60e-127
RNA polymerase sigma factor rpoS similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 258.0
  • Bit_score: 392
  • Evalue 1.20e-106

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Taxonomy

Shigella dysenteriae → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGACGCGGAATTTGATGAGAACGGAGTAGAGGCTTTTGACGAAAAAGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCTGAAGAAGAGCTGTTATCGCAGGGTGCCACACAGCGTGTACTGGACGCGACTCAGCTTTACCTTGGGGAGATTGGTTACTCCCCACTGCTAACGGCCGAAGAAGAAGTCTATTTCGCACGTCGTGCGTTTGACCCGGAACGCGGGTTCCGTTTCTCAACCTACGCGACCTGGTGGATTCGTCAGACCATCGAACGGGCTATTATGAACCAGACCCGTACGATCCGCCTGCCGATTCACATCGTCAAAGAGTTGAACGTTTATCTGCGCACCGCGCGCGAGTTGTCCCATAAACTGGACCACGAGCCAAGCGCAGAAGAGATTGCCGAGCAACTCGATAAACCGGTTGATGACGTTAGCCGTATGCTGCGTCTCAACGAGCGCATTACCTCCGTTGACACCCCGCTGGGTGGCGACTCCGAAAAAGCGCTGCTGGACATCCTGGCCGATGAAAAAGACAACGGTCCGGAAGATACCACGCAGGACGATGACATGAAGCAGAGCATCGTCAAATGGCTGTTCGAACTGAACGCCAAACAGCGTGAAGTGCTGGCACGTCGTTTCGGTTTACTGGGGTATGAAGCTGCGACACTGGAAGACGTCGGCCGCGAAATTGGCCTGACTCGTGAACGTGTTCGTCAGATTCAGGTTGAAGGTCTGCGCCGCCTGCGTGAAATCCTGCAGGGGCAAGGTCTGAATATCGAAGCGCTGTTCCGCGAATAA
PROTEIN sequence
Length: 281
MSQNTLKVHDLNEDAEFDENGVEAFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRAFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQGQGLNIEALFRE*