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NECEvent2014_6_6_Staphylococcus_epidermidis_32_5_v_partial

NECEvent2014_6_6_Staphylococcus_epidermidis_32_7
In projects: NECEvent2014_6_6

Consensus taxonomy: Staphylococcus epidermidis  →  Staphylococcus  →  Bacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Description

16S rRNA 100% to Staphylococcus epidermidis strain SR1

Displaying items 301-324 of 324 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
NECEvent2014_6_6_scaffold_5408
176_006_scaffold_5408
Species: Staphylococcus epidermidis (100%)
1 1242 bp 33.25 5.07 100.00
NECEvent2014_6_6_scaffold_5928
176_006_scaffold_5928
Species: Staphylococcus epidermidis (100%)
2 1104 bp 33.42 5.16 100.00
NECEvent2014_6_6_scaffold_6397
176_006_scaffold_6397
Species: Staphylococcus epidermidis (100%)
1 1014 bp 35.11 4.44 100.00
NECEvent2014_6_6_scaffold_4599
176_006_scaffold_4599
Species: Staphylococcus epidermidis (100%)
2 1562 bp 33.29 4.23 100.06
NECEvent2014_6_6_scaffold_5496
176_006_scaffold_5496
Species: Staphylococcus epidermidis (100%)
2 1214 bp 34.93 5.07 100.08
NECEvent2014_6_6_scaffold_5838
176_006_scaffold_5838
Species: Staphylococcus epidermidis (100%)
2 1124 bp 32.38 5.34 100.09
NECEvent2014_6_6_scaffold_6120
176_006_scaffold_6120
Species: Staphylococcus epidermidis (50%)
2 1067 bp 36.36 5.06 100.09
NECEvent2014_6_6_scaffold_4557
176_006_scaffold_4557
Species: Staphylococcus epidermidis (100%)
2 1580 bp 33.04 3.42 100.25
NECEvent2014_6_6_scaffold_4054
176_006_scaffold_4054
Species: Staphylococcus epidermidis (100%)
2 1876 bp 36.46 4.16 100.27
NECEvent2014_6_6_scaffold_4134
176_006_scaffold_4134
Species: Staphylococcus epidermidis (100%)
2 1821 bp 30.37 3.79 100.33
NECEvent2014_6_6_scaffold_5437
176_006_scaffold_5437
Species: Staphylococcus epidermidis (100%)
3 1231 bp 32.01 4.39 100.41
NECEvent2014_6_6_scaffold_5974
176_006_scaffold_5974
Species: Staphylococcus epidermidis (100%)
2 1092 bp 33.15 3.57 100.55
NECEvent2014_6_6_scaffold_4868
176_006_scaffold_4868
Species: Staphylococcus epidermidis (100%)
2 1438 bp 35.88 3.76 100.56
NECEvent2014_6_6_scaffold_4974
176_006_scaffold_4974
Species: Staphylococcus epidermidis (100%)
2 1389 bp 33.77 4.54 100.65
NECEvent2014_6_6_scaffold_5550
176_006_scaffold_5550
Species: Staphylococcus epidermidis (100%)
2 1197 bp 30.08 4.01 100.75
NECEvent2014_6_6_scaffold_3967
176_006_scaffold_3967
Species: Staphylococcus sp. DORA_6_22 (75%)
4 1943 bp 30.21 4.48 100.82
NECEvent2014_6_6_scaffold_6451
176_006_scaffold_6451
Species: Staphylococcus epidermidis (100%)
2 1002 bp 33.13 2.69 100.90
NECEvent2014_6_6_scaffold_6116
176_006_scaffold_6116
Species: Staphylococcus epidermidis (100%)
3 1067 bp 34.40 4.22 100.94
NECEvent2014_6_6_scaffold_5685
176_006_scaffold_5685
Species: Staphylococcus epidermidis (100%)
3 1161 bp 31.78 5.17 101.03
NECEvent2014_6_6_scaffold_4851
176_006_scaffold_4851
Species: Staphylococcus epidermidis (100%)
3 1442 bp 34.81 3.95 101.53
NECEvent2014_6_6_scaffold_6011
176_006_scaffold_6011
Species: Staphylococcus epidermidis (66.67%)
3 1085 bp 33.27 3.59 102.03
NECEvent2014_6_6_scaffold_6361
176_006_scaffold_6361
Species: Staphylococcus epidermidis (50%)
2 1020 bp 33.43 3.24 102.94
NECEvent2014_6_6_scaffold_4408
176_006_scaffold_4408
Genus: Staphylococcus (66.67%)
3 1649 bp 32.99 7.46 103.70
NECEvent2014_6_6_scaffold_4956
176_006_scaffold_4956
Species: Staphylococcus epidermidis (50%)
2 1395 bp 26.52 4.30 108.17
Displaying items 301-324 of 324 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.