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NECEvent2014_6_6_scaffold_6159_1

Organism: NECEvent2014_6_6_Clostridiales-rel_29_10_hint

partial RP 0 / 55 BSCG 0 / 51 ASCG 3 / 38
Location: 2..511

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1561 species="Bacteria; Firm similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 167.0
  • Bit_score: 251
  • Evalue 7.50e-64
Transcription-repair-coupling factor n=1 Tax=Clostridium colicanis 209318 RepID=N9XKY5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 167.0
  • Bit_score: 245
  • Evalue 3.80e-62
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 167.0
  • Bit_score: 250
  • Evalue 2.60e-64

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 510
TATTGTAGAATGCTAGAAGATACAGTGAAACTAATTAAGGGTGATATTGATAAAGAACCTATAGAGACAACAGTTGATTTAAAAGTTGATGCATATATCCCATCATCATATATAGAAGATGAGATGCAAAAAATAGAAGTGTATAAGAAGATTGCAGCTATAGAAAGTATAGACGAGTATATGGATATAAAAGAGGAATTAGAGGATAGGTATTCAGATATTCCAGACCCTGTTTATAACTTAATGGATATTGCGTATATAAAGAGTAGAGCTAAGTTATTATCCATAGAAGAAATAAAAGAATCTGGAAATGATGTTATCTTTAGATTCCAAGCAGGAGACAGTAATTACGAGAAGATATTTAAAGTAATAATAGAGAAGTATAAAGATAGTATAATGCTGAAGTTTGGGGAAATACCATCCTTTATATTTAAGTTAAAGGACCAAAAGAAAGAAAATATGTTAGCTTTCTTTAAAGAGATGTTAGAAAATTTAATAAAAAATAAATAA
PROTEIN sequence
Length: 170
YCRMLEDTVKLIKGDIDKEPIETTVDLKVDAYIPSSYIEDEMQKIEVYKKIAAIESIDEYMDIKEELEDRYSDIPDPVYNLMDIAYIKSRAKLLSIEEIKESGNDVIFRFQAGDSNYEKIFKVIIEKYKDSIMLKFGEIPSFIFKLKDQKKENMLAFFKEMLENLIKNK*