ggKbase home page

NECEvent2014_6_7_scaffold_3963_3

Organism: NECEvent2014_6_7_UNK

partial RP 2 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: comp(1309..1797)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 domain protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWH0_CLOBA similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 155.0
  • Bit_score: 127
  • Evalue 1.10e-26
RNA polymerase sigma 70 {ECO:0000313|EMBL:KIL07513.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 155.0
  • Bit_score: 129
  • Evalue 4.10e-27
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 155.0
  • Bit_score: 127
  • Evalue 3.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
CTTACTAAAAAGGTATTTGCTCCTGGATATGAAAGGGAGGATCTTATTAGTGAATCCTATAGAATCCTTTTTAACTGCATAGCTAAATATGATACAAGTAAACATAGATTTGTTGCTTATTCTATTAATGCTATAAAAAATAACTTCAAATATATACTTAGGAAATCTACTCAAAGGGATGACCATGAGGGCTTGCTCTCTGGTGATATTTCTACAGATCTAGAATCTCTTCTTAAACCTGAAGAATGTCCTTATGAGAAAAAGGAGTCAGACATTATAGATGCTGAACTTATTAAACATGTTTTTAAAGGGCTAAATAAAGATGAACTTGAATTAGTTAACCTTGTGGTTTTTGAGGAACATACAGTTAGAGAATATGCTGCATTTAAAAATCTTAACTACTCCACTGCTGTAAAGAAAAAGAAATCAGCATTAGATAAAATGAAAATTCCTTTTAATGAATTTATAAATAATACTTATAATGTTTAA
PROTEIN sequence
Length: 163
LTKKVFAPGYEREDLISESYRILFNCIAKYDTSKHRFVAYSINAIKNNFKYILRKSTQRDDHEGLLSGDISTDLESLLKPEECPYEKKESDIIDAELIKHVFKGLNKDELELVNLVVFEEHTVREYAAFKNLNYSTAVKKKKSALDKMKIPFNEFINNTYNV*