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NECEvent2014_6_7_scaffold_67

Alias: 176_007_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_67_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9..599)
DNA (591bp) protein (197aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7L9_9CLOT rbh
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEH98121.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_6_7_scaffold_67_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(583..1920)
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGI5_9CLOT rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
rimO; ribosomal protein S12 methylthiotransferase RimO
NECEvent2014_6_7_scaffold_67_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..4436)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEM6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98123.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ftsK; DNA translocase FtsK
NECEvent2014_6_7_scaffold_67_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4585..5325)
DNA (741bp) protein (247aa)
clpP; Clp protease (EC:3.4.21.92)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Y6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98124.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_67_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5372..6574)
DNA (1203bp) protein (401aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
aspartate kinase I (EC:2.7.2.4)
Aspartate kinase, monofunctional class n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H319_9CLOT rbh
NECEvent2014_6_7_scaffold_67_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6593..6919)
DNA (327bp) protein (109aa)
YlmC/YmxH family sporulation protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M1_9CLOT
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:EEH98126.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
sporulation protein YlmC/YmxH
NECEvent2014_6_7_scaffold_67_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6996..8303)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGI8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98127.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase M16 domain-containing protein
NECEvent2014_6_7_scaffold_67_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8454..10568)
DNA (2115bp) protein (705aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=457396
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEM7_9CLOT rbh
NECEvent2014_6_7_scaffold_67_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10649..10912)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Y7_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsO; 30S ribosomal protein S15
NECEvent2014_6_7_scaffold_67_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11041..11964)
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=457396 species="Bacteria; Firmicutes;
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H321_9CLOT rbh
ribC; bifunctional riboflavin kinase/FMN adenylyltransferase
NECEvent2014_6_7_scaffold_67_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11976..12854)
DNA (879bp) protein (293aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M2_9CLOT rbh
NECEvent2014_6_7_scaffold_67_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12854..13831)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98132.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phosphoesterase domain-containing protein
NECEvent2014_6_7_scaffold_67_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13831..14181)
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEM8_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rbfA; ribosome-binding factor A
NECEvent2014_6_7_scaffold_67_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14200..16245)
DNA (2046bp) protein (682aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Z0_9CLOT rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
infB; translation initiation factor IF-2
NECEvent2014_6_7_scaffold_67_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16261..16575)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H324_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98135.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
NECEvent2014_6_7_scaffold_67_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16568..16834)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98136.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_67_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16847..17929)
DNA (1083bp) protein (361aa)
Transcription termination factor NusA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ3_9CLOT rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
nusA; transcription termination/antitermination protein NusA
NECEvent2014_6_7_scaffold_67_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17946..18404)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN0_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
hypothetical protein
NECEvent2014_6_7_scaffold_67_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18670..22998)
DNA (4329bp) protein (1443aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=457396 species="Bacteria; Firmicut
polC; DNA polymerase III, alpha subunit, Gram-positive type (EC:2.7.7.7) rbh
DNA polymerase III polC-type n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Z2_9CLOT rbh
NECEvent2014_6_7_scaffold_67_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23196..24245)
DNA (1050bp) protein (350aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H327_9CLOT rbh
NECEvent2014_6_7_scaffold_67_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24259..25278)
DNA (1020bp) protein (340aa)
RIP metalloprotease RseP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M4_9CLOT rbh
RIP metalloprotease RseP {ECO:0000313|EMBL:EEH98141.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rseP; RIP metalloprotease RseP
NECEvent2014_6_7_scaffold_67_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25292..26452)
DNA (1161bp) protein (387aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ7_9CLOT rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase
NECEvent2014_6_7_scaffold_67_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26476..27432)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98143.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_67_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27811..28605)
DNA (795bp) protein (265aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Z4_9CLOT rbh
cytidylyltransferase family protein
NECEvent2014_6_7_scaffold_67_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28623..29384)
DNA (762bp) protein (254aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Di-trans,poly-cis-decaprenylcistransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H329_9CLOT rbh
NECEvent2014_6_7_scaffold_67_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29440..29997)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M6_9CLOT rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=457396 species="Bacteria;
frr; ribosome recycling factor
NECEvent2014_6_7_scaffold_67_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30007..30723)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGK2_9CLOT rbh
pyrH; uridylate kinase
NECEvent2014_6_7_scaffold_67_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30793..31704)
DNA (912bp) protein (304aa)
Elongation factor Ts n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN3_9CLOT rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridi
tsf; elongation factor Ts
NECEvent2014_6_7_scaffold_67_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31789..32490)
DNA (702bp) protein (234aa)
30S ribosomal protein S2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Z7_9CLOT rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpsB; ribosomal protein S2
NECEvent2014_6_7_scaffold_67_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32822..33598)
DNA (777bp) protein (259aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H332_9CLOT rbh
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
codY; transcriptional repressor CodY
Displaying items 1-30 of 77 in total

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