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NECEvent2014_6_7_scaffold_220

Alias: 176_007_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_220_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17..1744)
DNA (1728bp) protein (576aa)
Hydrogenase, Fe-only n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4W4_9CLOT rbh
Hydrogenase, Fe-only {ECO:0000313|EMBL:EEH99039.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
[Fe] hydrogenase
NECEvent2014_6_7_scaffold_220_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1745..3649)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H425_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99040.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative [Fe] hydrogenase, electron-transfer subunit
NECEvent2014_6_7_scaffold_220_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3651..4172)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8J5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99041.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
NECEvent2014_6_7_scaffold_220_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4409..4867)
DNA (459bp) protein (153aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO
luxS; S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHM3_9CLOT rbh
NECEvent2014_6_7_scaffold_220_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4930..5823)
DNA (894bp) protein (298aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGD1_9CLOT rbh
NECEvent2014_6_7_scaffold_220_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6280..6813)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4W6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99044.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acetyltransferase family protein
NECEvent2014_6_7_scaffold_220_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7019..7972)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H426_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99045.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tagO; UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase
NECEvent2014_6_7_scaffold_220_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8217..8858)
DNA (642bp) protein (214aa)
V-type ATP synthase subunit D n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8J7_9CLOT rbh
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
ntpD; V-type sodium ATPase subunit D
NECEvent2014_6_7_scaffold_220_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8861..10243)
DNA (1383bp) protein (461aa)
V-type ATP synthase beta chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHM5_9CLOT rbh
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
ntpB; V-type sodium ATPase subunit B
NECEvent2014_6_7_scaffold_220_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10236..12017)
DNA (1782bp) protein (594aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=457396 species="Bacteria;
ntpA; V-type sodium ATPase catalytic subunit A (EC:3.6.3.15)
V-type ATP synthase alpha chain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGD4_9CLOT rbh
NECEvent2014_6_7_scaffold_220_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12035..12346)
DNA (312bp) protein (104aa)
V-type ATP synthase subunit F n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4W8_9CLOT
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
ATP synthase (F/14-kDa) subunit
NECEvent2014_6_7_scaffold_220_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12339..13340)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H427_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99051.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
V-type ATP synthase subunit C
NECEvent2014_6_7_scaffold_220_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13353..13943)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8J8_9CLOT rbh
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
ATP synthase (E/31 kDa) subunit
NECEvent2014_6_7_scaffold_220_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13962..14447)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHM7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99053.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ntpK; V-type sodium ATPase subunit K
NECEvent2014_6_7_scaffold_220_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14461..16416)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGD7_9CLOT rbh
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;
V-type ATPase
NECEvent2014_6_7_scaffold_220_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16403..16729)
DNA (327bp) protein (109aa)
ATP synthase archaeal, H subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4X0_9CLOT
ATP synthase archaeal, H subunit {ECO:0000313|EMBL:EEH99055.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.
ATP synthase archaeal, H subunit
NECEvent2014_6_7_scaffold_220_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16928..18604)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H428_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99056.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
radical SAM domain protein
NECEvent2014_6_7_scaffold_220_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18627..19124)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8J9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99057.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_220_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19281..20573)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHM8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99058.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
membrane protein
NECEvent2014_6_7_scaffold_220_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20747..22246
DNA (1500bp) protein (500aa)
Stage V sporulation protein B n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGE0_9CLOT rbh
Stage V sporulation protein B {ECO:0000313|EMBL:EEH99059.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVB; stage V sporulation protein B
NECEvent2014_6_7_scaffold_220_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22374..22511)
DNA (138bp) protein (46aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H430_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EEH99061.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
RNA polymerase sigma-70 factor
NECEvent2014_6_7_scaffold_220_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22871..23779)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CKF0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR27656.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
dipeptide ABC transporter substrate-binding protein
NECEvent2014_6_7_scaffold_220_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23796..24656)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEC5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR27657.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_6_7_scaffold_220_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24668..25186)
DNA (519bp) protein (173aa)
ECF subfamily RNA polymerase sigma-24 subunit (Fragment) n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS11_9CLOT
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EOR19802.1}; Flags: Fragment;; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
sigma-70 family RNA polymerase sigma factor
NECEvent2014_6_7_scaffold_220_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25647..27263)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8K1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99062.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
polysaccharide biosynthesis family protein
NECEvent2014_6_7_scaffold_220_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27277..28248)
DNA (972bp) protein (324aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
RluA family pseudouridine synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHN0_9CLOT rbh
pseudouridine synthase, RluA family protein
NECEvent2014_6_7_scaffold_220_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28316..29575)
DNA (1260bp) protein (420aa)
thermostable carboxypeptidase 1 (EC:3.4.17.-)
Amidohydrolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGE2_9CLOT rbh
Amidohydrolase {ECO:0000313|EMBL:EEH99064.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_7_scaffold_220_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29544..31568)
DNA (2025bp) protein (675aa)
Cell division protein FtsA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4X4_9CLOT rbh
Cell division protein FtsA {ECO:0000313|EMBL:EEH99065.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
actin-like ATPase involved in cell division
NECEvent2014_6_7_scaffold_220_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31833..33824)
DNA (1992bp) protein (664aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8K2_9CLOT rbh
UvrD/REP helicase
NECEvent2014_6_7_scaffold_220_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34183..35649
DNA (1467bp) protein (489aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=457396 species="
Putative nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHN1_9CLOT rbh
nicotinate phosphoribosyltransferase family protein
Displaying items 1-30 of 40 in total

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