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NECEvent2014_6_7_scaffold_418_24

Organism: NECEvent2014_6_7_Clostridium_7_2_43FAA-rel_28_56

near complete RP 49 / 55 MC: 7 BSCG 51 / 51 MC: 6 ASCG 15 / 38 MC: 1
Location: comp(24254..24826)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4R6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 190.0
  • Bit_score: 377
  • Evalue 9.50e-102
  • rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EEH98905.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 190.0
  • Bit_score: 377
  • Evalue 1.30e-101
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 165.0
  • Bit_score: 185
  • Evalue 2.00e-44

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 573
ATGAATATGTCTAATATTATTCCTATAGGGGTATTCAATAAATATAAAGATGGAAAGCTTAAGAAAAATAATGTTAGATTAGCCATAGAGGGAGATAAGGAAGCATTTAATATCTTAGTTCAAGAGAACTTAAAGTCTTTATATATAGTAGCTAGGGGCATGCTAAATAGTGAATATGATATAGAGGATGCTTTTCAAAATACTATACTTAAGGCTTATGAAAAAATTTCAGGTTTAAAAAATGAAGAGTTTTTTAAAACATGGTTAACAAGGATTTTGATAAATGAATGTAATAATATAATAAGAAAAAATAAAAAGGTTACTTATATTGAAGATTCACAAATTAACAATGAGGTTTATGAGGATAAATATAAAAATATAGATTTAATTAGGGCTATTGATTCATTGGGTTCTGATTTAAGAATAACTATGTGGTTATTTTATTTCGATGATATGTCAATAGAAGAAATAAGTAATGCCTTAAAAATTCCTAAGGGAACTATAAAGTCTAGGCTTAATAGAGGTAGAGAAAAAATTTATAATATTATGAGTGAGGGTGATAATCATGAATAA
PROTEIN sequence
Length: 191
MNMSNIIPIGVFNKYKDGKLKKNNVRLAIEGDKEAFNILVQENLKSLYIVARGMLNSEYDIEDAFQNTILKAYEKISGLKNEEFFKTWLTRILINECNNIIRKNKKVTYIEDSQINNEVYEDKYKNIDLIRAIDSLGSDLRITMWLFYFDDMSIEEISNALKIPKGTIKSRLNRGREKIYNIMSEGDNHE*