ggKbase home page
Advanced Search
Search Help

NECEvent2014_6_7_scaffold_703_11

Organism: NECEvent2014_6_7_Clostridium_7_2_43FAA-rel_28_56

near complete RP 49 / 55 MC: 7 BSCG 51 / 51 MC: 6 ASCG 15 / 38 MC: 1
Location: comp(7917..11426)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=457396 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 999.99
  • Bit_score: 2271
  • Evalue 0.0
mfd; transcription-repair-coupling factor Mfd (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 999.99
  • Bit_score: 1721
  • Evalue 0.0
Transcription-repair coupling factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH01_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 999.99
  • Bit_score: 2271
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3510
ATGAGATTAAAGGGGGTACTACAACCTTTAAGGGATGACTCTACTTTCAATGAAATAATAACTAGTATTAATAATAAAAGGTACCCGATTAATATAAATGGATTATCGGATTCAGGAAAAAGCTATGGAATTTTTGGAATATATGAAAGTATAGATTCACCTATGATAATACTTACTCATAGTGATATGGAAGCGAAGAATATATATGAAGATTTAAGTTTTTATACAAATGATATTTATTATTTTCCTGCAAAAGAGGTAGTTTTTTATAATATAGATGCTATTTCGGGAGATTTGAGATGGGCAAGACTAAAGGTAATAAAAGAAATTTTAGATAATAAAAATAAGATAATAGTAACATCAATCGATACCTTAACATCAGTATATACTCCTAAGGAATTATTTAGGGAATATACATTTAAATTAAGTGTAGATGATGATGTTAATTTTAAAGATTTATCTAAAAAACTATTAGAAAGTGGTTATGAAAGGGTAGAGGCCGTAGAAGGAAAGGGAGAATTTTCTTTAAGAGGAGGAATTCTTGATGTATTTCCACCAATAGCTACTTATCCATATAGAATAGAGCTTTTTGGAGATTCAATAGAGTCTATACGAACTTTTAATAAAGAATCACAAAGAAGTATTGAAAAGGTTGATAATATAGAGATATTCCCAGCCAAAGAGATTATATTAAATGAAGAAGCCTTAAATAGAGGAAAAGAAGCCATTTTAAAAGAATTCCAAGAAATTAAAGGTAAAGCTAAAGAAAATGATGAAAGAATACAAAAGTTGGAATCGATTATAAATGCGAACATAGAATCTTTAACAGAAACTTTAACATTTGAAACTTTAGATAGTTATTTACCTTATTTCTATGATAAGACAGATAGCTTTTTTAGCTATGTAAAAGATTATATGTATGTAATTGATGACGTTAAAAAATGTGAAGGTAAGCTAGAAAGCTGTTATTTTGAATTTAGTGAAAATTATGAAGCCTTTTTACAAAGAGGAGGAATTTTACCTTCTCAAAGTAAACTTTTATTAAATAAAGATGATTTAATTGAAAAATTAGAATCACAAAAATCAATAACTTTAGATATATTTGCTGTTAATAGTAAAGTTTTAAACCCTATAGAAAGATATTCGCTTAATGTATCAACTCTTAATAGCTATCAAGGTCAATTAGATTTACTAATAGATGATATTAAGGAGAAAAAGTCCAATGGATATAAGACAATAATATTATCGGGAACAAGAACTAGGGGAGAAAGACTGGTAAATACATTAAGAGATAGAGAAATTGAAAGCTCTTATAGAGAGGATATAAAATCAATAGAGTTTGGAGAAGTTGTCATTACATTCGGAAATCTATTAAAAGGTTTTGAGTATCCTAATTTAAAGTTATGTGTAATATCAGATAAAGATGTTTTTGGAGAAGCTAAAAGAAAAATATCAAAAAAGGCTAGTTCAAGAAAAGGTATAGGGAAAATAAAGAGTTTTGCAGAGCTTAAGCTTGGAGATTATGTTGTTCATGCTAATCATGGAGTTGGGGTTTATAAAGGAATAAAACAAATTGAGGTTGGTGGACATACAAGAGATTATCTAGATATTGTTTATGATAAAGGTGATAAACTATATGTTCCTGTTGATCAGTTAGATTTAGTCCAAAAGTATATAGGAAGTGAAGGTAAAACTCCTAAGGTAAATAAGCTTGGAAGTAATGAATGGAATAAAGCAAAAGCAAAAGTTAAAAAATCTATAAATGAAATAGCAGAAGACTTAGTTAAGCTTTATGCTGCAAGAGCTACTTTAAAGGGATATAAGTATAGAAAAGATACAGAATGGCAAAGACAGTTTGAAGATGAATTTCCATTTGAAGAAACTCCAGATCAATTAACATCATTAGAAGAAATTAAGCATGACATGGAAACTGATAAACCTATGGATAGGCTTTTATGTGGTGATGTTGGTTATGGAAAAACAGAGGTTGCTATTAGGGCAGCATTTAAAGCTGTTATGGATGGTAAGCAAGTAGCATTTTTAGTACCTACGACTATACTAGCAGAGCAACATTATAAAAATATGACAAAGAGATTTTCAGATTTCCCAGTGAAAATAGATATGATAAGTAGATTTAGAAGTGCAAAAGAACAAAAAGCAACGCTTCAAACTGTAAAAGAAGGTAATGTAGATATATTAATAGGAACTCATAGATTGGTTTCTAAGGATATTGTTTTTAAAGATTTAGGGCTTCTAATAATAGATGAAGAGCAAAGATTTGGAGTTGCTCAAAAAGAAAAAATAAAAGGATTAAAGAAAAATGTTGATGTATTAACATTAAGTGCAACACCAATACCAAGAACTCTTCATATGTCATTAACAGGAGCAAGGGATATATCTGTAATAGAGACACCACCGGAGGAAAGATATCCAATACAAACTTACGTAGTGGAGCAAAATGATCAACTTGTAAGAGATGCGATATTAAGAGAAGTGAATAGAAGTGGTCAAGTTTATTATGTCTATAATAGAGTTGAAAGTATAGAGGGGATGGCTAAATACATCAGGGAATTAGTTCCAGAGTGTAAAGTTGGAATTATACATGGACAAATGACTGAAAGACAACTTGAAAAAGAAATGGTAAGCTTTATGAATAAAGATTACGATATATTAGTATGCACAACAATTATAGAAACAGGAATAGATATACCAAATGTTAATACTATGATAATTCACGATTCAGATAAAATGGGATTATCACAACTTTATCAATTAAGAGGTAGAGTTGGAAGGTCAAATAGAATAGCATATGCTTACTTTATGTACACTAAAGATAAAATATTAACAGAGGTAGCTGAAAAAAGGCTAAAGGCTCTTAAAGATTTCACAGAGCTTGGATCAGGATTTAAGATAGCTATGAGAGATTTAGAAATAAGAGGAGCTGGAAATATGATGGGTTCGGCTCAACATGGACACATGGCTGCAATAGGATATGATTTATATTGTAGAATGCTGGAGGATACAATAAAAATTATTAAAGGTGAGATAGAGAAGGAACCTATTGAAACTACAGTAGATATAAAGGTAGATGCATATATACCAGGAACTTATATTGAAGATGAAATTCAAAAAATAGAAATATATAAGAAAATTGCTGCTATTGATGGATTAGAAGATTATATGGATATTAAATCTGAACTTGAAGATAGATATTCAGAAATTCCAGATCCTGTTTATAATTTAATGGATATAGCTTATATAAAGAGTAAGGCTAAACTTATTTCAATTGAAGAAATAAAGGAAACACCAAAGGAAGTTAAGTTTATATTTGCGGATGGAATTAAGAATTTAAATAACATATATAAATATCTGTTGGAGAATTATAAGGATAAAGTATTTTTAATGTTTGGAGAAAAACCATATTTTGCAGTGAGAAGTTCAGAGATAAAGAAAGAAACTATATTAGGATTTTATAAGGAAATATTAGAAAATTTAACAAAAAATATGTAA
PROTEIN sequence
Length: 1170
MRLKGVLQPLRDDSTFNEIITSINNKRYPININGLSDSGKSYGIFGIYESIDSPMIILTHSDMEAKNIYEDLSFYTNDIYYFPAKEVVFYNIDAISGDLRWARLKVIKEILDNKNKIIVTSIDTLTSVYTPKELFREYTFKLSVDDDVNFKDLSKKLLESGYERVEAVEGKGEFSLRGGILDVFPPIATYPYRIELFGDSIESIRTFNKESQRSIEKVDNIEIFPAKEIILNEEALNRGKEAILKEFQEIKGKAKENDERIQKLESIINANIESLTETLTFETLDSYLPYFYDKTDSFFSYVKDYMYVIDDVKKCEGKLESCYFEFSENYEAFLQRGGILPSQSKLLLNKDDLIEKLESQKSITLDIFAVNSKVLNPIERYSLNVSTLNSYQGQLDLLIDDIKEKKSNGYKTIILSGTRTRGERLVNTLRDREIESSYREDIKSIEFGEVVITFGNLLKGFEYPNLKLCVISDKDVFGEAKRKISKKASSRKGIGKIKSFAELKLGDYVVHANHGVGVYKGIKQIEVGGHTRDYLDIVYDKGDKLYVPVDQLDLVQKYIGSEGKTPKVNKLGSNEWNKAKAKVKKSINEIAEDLVKLYAARATLKGYKYRKDTEWQRQFEDEFPFEETPDQLTSLEEIKHDMETDKPMDRLLCGDVGYGKTEVAIRAAFKAVMDGKQVAFLVPTTILAEQHYKNMTKRFSDFPVKIDMISRFRSAKEQKATLQTVKEGNVDILIGTHRLVSKDIVFKDLGLLIIDEEQRFGVAQKEKIKGLKKNVDVLTLSATPIPRTLHMSLTGARDISVIETPPEERYPIQTYVVEQNDQLVRDAILREVNRSGQVYYVYNRVESIEGMAKYIRELVPECKVGIIHGQMTERQLEKEMVSFMNKDYDILVCTTIIETGIDIPNVNTMIIHDSDKMGLSQLYQLRGRVGRSNRIAYAYFMYTKDKILTEVAEKRLKALKDFTELGSGFKIAMRDLEIRGAGNMMGSAQHGHMAAIGYDLYCRMLEDTIKIIKGEIEKEPIETTVDIKVDAYIPGTYIEDEIQKIEIYKKIAAIDGLEDYMDIKSELEDRYSEIPDPVYNLMDIAYIKSKAKLISIEEIKETPKEVKFIFADGIKNLNNIYKYLLENYKDKVFLMFGEKPYFAVRSSEIKKETILGFYKEILENLTKNM*