ggKbase home page

NECEvent2014_6_7_scaffold_6490_2

Organism: NECEvent2014_6_7_Clostridium_7_2_43FAA-rel_28_56

near complete RP 49 / 55 MC: 7 BSCG 51 / 51 MC: 6 ASCG 15 / 38 MC: 1
Location: comp(199..393)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=2 Tax=Clostridium sordellii RepID=T0CF42_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 64.0
  • Bit_score: 128
  • Evalue 2.60e-27
Helix-turn-helix family protein {ECO:0000313|EMBL:EPZ57382.1}; TaxID=1292036 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 64.0
  • Bit_score: 128
  • Evalue 3.60e-27
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 64.0
  • Bit_score: 123
  • Evalue 1.80e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 195
ATGAAAAATAAGAGAATGAAAATAGCACGTATAGAGTGTGATATGAAACAAGAAGATTTAGCAAAGGCTGTAGGTGTAACAAGACAAACTATTGGATTAATTGAATCAGGAGATTATAACCCTACACTTAATCTTTGTGTATCAATATGTAAAGCACTTGGAAAAACATTAAATGATTTATTTTGGGAGGAATAG
PROTEIN sequence
Length: 65
MKNKRMKIARIECDMKQEDLAKAVGVTRQTIGLIESGDYNPTLNLCVSICKALGKTLNDLFWEE*